Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_148918.1
- Aligned Length:
- 3116
- Identities:
- 187
- Gaps:
- 2901
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAAGAGAAAATAAGGCATTTGGGATGCCGATGTTAAAAGGAGAAGGTAATCAGAGAAGAAAAAAGGAAGTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGAGAGTTCTGCGAAGATTTTGAAGATTTCTAGCAGAGAAGCAGGGGGTTCTGGAGAAGGGAATAGACTTGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATACCCAGGAAGACTTCCTCAACAGATGTCCCATCATGCTGAGATTCAACGCGACATTTTAGAGTCATGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCATGTGAGAAAAAAAGTCCCAGTAACCTTTGTTGGGGCTGGAGGGCAGGATCCCGAGGTCCCGGAGGAGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCACCTCCTCCAGCCAGGACAGCGCGTGCCTCAGGACGTCCAGCACCACCTTCTGGAGCCCCGAGACAGGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCTCACCTGGAGGTGCTGAAGAAGGTCGACCTCCTTCTTCAGGTCATGGCTGCAACAGGATATTTTCATGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTGCAAAGAGGTGAGATCATGAGGAGCCCAGGCCCTGTGGCCAGAAATAGCCCCTGACGTGACCTTCGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAGCGTTCTTGACTCTGCCACGAAGCAGGCAGCGCCACGTATTGGCCGCCTTGGGAGGACTCAGTTTTTTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTTTAAAATTTTTATGTTTTGACAGGTTTTTTTTTAATACTCTAATTTGGACTTTTGATGGTCAAAGCGAACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCTTTTAGGTCTATGAAACCCCAGAGCCAAAGTACCATCAACAGTTTGGCTGCAATGAGAAGCAAATGTGGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTTCTTTTTTCCATTCGTCAGAATTCCTGCCAAGATCAACACACAAGCTGGTCGGAAAGCGTGGTTTCCTGAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAAAGAGTGCTGACAAGCCAGCATTTGCACAAACTCCCCAAACAGGAGCTGCTGATTTCCAGAGAAAGCAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCACCGCCTGCTCTGATAAGCCATGTCCCAGGGTGGGGGCCGCAGGGCTGTGGCCAAGTCCTCCCGTCCCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCTCCAGAGTCAAAAGCAACGGTGTGGAAACCGCCTTTTGTGGCTGGGCCAAAACAAGAAAATGCAAATAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGCAGGAATGTTTCTTTGGTTTCTCTGGAAATAACATAGGGGCTATGAAAACAATTTCTTTTTGGCTGGGGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCGGGCCGCTCAAAGTCAGTAATTGAAGATGCTCAGGCATCTTTTTTGGACACGCCAAGTTCTCCCGGGAGGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTTTTTAGGCCCTTTGTTTTTTCTTCTCCAACAAGTTTCTCCAACAAGAGGAAAAAGTGGATAGAAAAGCCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCATTTCTGCCCAACTTGCTCCAAAAAAGCTGGGCAATTTCCCAAATAAGCCGCACAAAAATTAGACAAAGAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCATTTGTGGAAAGCGTAAGGAGGGGCCACCTGGCAGCTGTCCAGCGACGTCCTCAGCTTCTCGATGTTCTCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGTCTCCTCCTGCTTGGAGTTGCTCAGCTGGGTCTCTTTCTGGAGGGTCCACTTTTTCTGCTGAAAATTGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGTCCTCAGTGACCTGGGTAATTTTCTCTATTAACTGGTGAGAAAAAGAAAAAGGAAAAAAAAAAAAAAGATG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAACATACAGGGGTGGGGGGCCCTGAGGGAAGGGGAATGGGAGAGGGGAGAGATGCAACTTAAGTCCCTGTCTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCACGGGAGGACAGAGGTCCTGATATGTCTTGGTGATGGCTGTCAAGGGGGACGTTGGTCCTGTCACCAGGGA 1702
Query 1 -----------------------------------------------------------ATGGAGTCTCATTC- 14
|.|||||.|||.||
Sbjct 1703 ATGAGTCCCAGAATCAGAGATTCTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTGCGACGGAGTTTCACTCT 1776
Query 15 TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCT 88
|||.||||||.||||||||.|.|||..||||||||||||||.||||||||.|||||..|.|.||||||||||||
Sbjct 1777 TGTTGCCCAGGCTGGAGTGCAATGGTTTGATCTCGGCTCACCGCAACCTCCGCCTCCTGGGTTCAAGCGATTCT 1850
Query 89 CCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTT 162
||||||||.|||||.|.||||||||.||||||||||||.|||.||||||||||||||| ||||||||||||
Sbjct 1851 CCTGCCTCAGCCTCTGAAGTAGCTGAGATTACAGGCACGCGCCACCATGCCCGGCTAA----TTTTGTATTTTT 1920
Query 163 AGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------- 219
|.||||||||||||||.||||||||||.|||||||||.|||||||||.|||||.|.|
Sbjct 1921 AATAGAGATGGGGTTTTACCATGTTGGTCAGGCTGGTTTCGAACTCCCGACCTGAGGTGATCCACCCGCCTCGG 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 CCTCTCAAAGTGCTGGCATTACAGGCATGAGCCACCACTCCTTGCCGATCAGAGATTATTTTTATGATCCAAAG 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 GCCTGTCTTGTGGCCCTGAGTTTGTTCCAGATTCTTCTGTGTTGTATAGGGATTCAGAACACTGAGCCTGATAT 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 TATGGGCTCATAAGCAGCAGGTCAGGTTCTCCCACACCCACTGAGAGCAGCCCACGGCACATTTTCCCATCTGT 2216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2217 GCTTTGACACAGGGGGCTAGAAAGTGTAGTGGAAGAACAGCAAGGCAATCATTACAGCCAGACATCCACCCTCA 2290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2291 CTGCCACTGTCAACTTTTCTCCTCTGAAGGAACGCGCCAGAACGCACTGGCTGTGGGGAGGCGGCTCCCTTTCT 2364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2365 CCCAGTGCTAATGGAGGCGAAACATGCATGTCTGGAGACCAGAAGTAAGCCCGAATGGTTTAATTTGATTTTCA 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 CAGACACATTTCAAGGGAGTTTTAACTGGCTTTTACTTTAAAAGCCAGGAAATCCCATAAAATCAAAACAAATC 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 TTTATGGTGTAGCAACAGTGTGAAAAATATGCCACCAACAAAAACAGAAACATATGCTCCCAGGGTCTGGAATC 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 CAGATCCACGAAGAAGAAGAAGAGGAAAGTGAAGGAGCCACGTGGCAGGGACGGCAGACTAACCTGTTGGTCGG 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 TGACGGGCTTGTCCCGGAACGGCTTCGCCCGTCCATAGGTGGCCTTGATGACTTGACTTCTGAAGTGCTCCAGC 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 TGCAGCAGAGAGGGGGCAACAGTGTCAGGGGGTCAGCAGGGGCCGGCAAGTGGGGGCAGCGTTTCCATGGCAGG 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 GTGCGGGAAACACCACTTAGCAGGGTTTGCACGCCTGAATGACCATTCCGCGTTATCAGAATCTTCACCGCTCA 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 CGGGGAGTGGCGGGACCCACAGAAGAAAAGAGAACAGCAGGCTTTAATTACTTTTTAGGCACGCCTGCCTAACC 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 CGAACGATGCCTGTGGTCAGTGCACACACATGTCTCAAACCCTCAGAAGAGCCTCTTGCTGCCAATTATCCAAT 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 GGGAAGTCTGGGGCCGGGAGCGCTCTTCCGTAATTGCTAAGTTGGCACCAGACTGTGAAATAAATATTGAGGCT 3104
Query 220 -------- 219
Sbjct 3105 GTCAGTCC 3112
