Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_148918.1
Aligned Length:
3116
Identities:
187
Gaps:
2901

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAAGAGAAAATAAGGCATTTGGGATGCCGATGTTAAAAGGAGAAGGTAATCAGAGAAGAAAAAAGGAAGTCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGAGAGTTCTGCGAAGATTTTGAAGATTTCTAGCAGAGAAGCAGGGGGTTCTGGAGAAGGGAATAGACTTGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGATACCCAGGAAGACTTCCTCAACAGATGTCCCATCATGCTGAGATTCAACGCGACATTTTAGAGTCATGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCATGTGAGAAAAAAAGTCCCAGTAACCTTTGTTGGGGCTGGAGGGCAGGATCCCGAGGTCCCGGAGGAGCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCACCTCCTCCAGCCAGGACAGCGCGTGCCTCAGGACGTCCAGCACCACCTTCTGGAGCCCCGAGACAGGTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCTCACCTGGAGGTGCTGAAGAAGGTCGACCTCCTTCTTCAGGTCATGGCTGCAACAGGATATTTTCATGCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCTGCAAAGAGGTGAGATCATGAGGAGCCCAGGCCCTGTGGCCAGAAATAGCCCCTGACGTGACCTTCGAGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACAGCGTTCTTGACTCTGCCACGAAGCAGGCAGCGCCACGTATTGGCCGCCTTGGGAGGACTCAGTTTTTTTCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTTTTAAAATTTTTATGTTTTGACAGGTTTTTTTTTAATACTCTAATTTGGACTTTTGATGGTCAAAGCGAACC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCCTTTTAGGTCTATGAAACCCCAGAGCCAAAGTACCATCAACAGTTTGGCTGCAATGAGAAGCAAATGTGGCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTTCTTTTTTCCATTCGTCAGAATTCCTGCCAAGATCAACACACAAGCTGGTCGGAAAGCGTGGTTTCCTGAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTGAAAGAGTGCTGACAAGCCAGCATTTGCACAAACTCCCCAAACAGGAGCTGCTGATTTCCAGAGAAAGCAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGCCACCGCCTGCTCTGATAAGCCATGTCCCAGGGTGGGGGCCGCAGGGCTGTGGCCAAGTCCTCCCGTCCCTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTCCTCCAGAGTCAAAAGCAACGGTGTGGAAACCGCCTTTTGTGGCTGGGCCAAAACAAGAAAATGCAAATAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAGCAGGAATGTTTCTTTGGTTTCTCTGGAAATAACATAGGGGCTATGAAAACAATTTCTTTTTGGCTGGGGAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCGGGCCGCTCAAAGTCAGTAATTGAAGATGCTCAGGCATCTTTTTTGGACACGCCAAGTTCTCCCGGGAGGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTTTTTAGGCCCTTTGTTTTTTCTTCTCCAACAAGTTTCTCCAACAAGAGGAAAAAGTGGATAGAAAAGCCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCATTTCTGCCCAACTTGCTCCAAAAAAGCTGGGCAATTTCCCAAATAAGCCGCACAAAAATTAGACAAAGAGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCATTTGTGGAAAGCGTAAGGAGGGGCCACCTGGCAGCTGTCCAGCGACGTCCTCAGCTTCTCGATGTTCTCGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGTCTCCTCCTGCTTGGAGTTGCTCAGCTGGGTCTCTTTCTGGAGGGTCCACTTTTTCTGCTGAAAATTGATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTGTCCTCAGTGACCTGGGTAATTTTCTCTATTAACTGGTGAGAAAAAGAAAAAGGAAAAAAAAAAAAAAGATG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TAACATACAGGGGTGGGGGGCCCTGAGGGAAGGGGAATGGGAGAGGGGAGAGATGCAACTTAAGTCCCTGTCTA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGCACGGGAGGACAGAGGTCCTGATATGTCTTGGTGATGGCTGTCAAGGGGGACGTTGGTCCTGTCACCAGGGA  1702

Query    1  -----------------------------------------------------------ATGGAGTCTCATTC-  14
                                                                       |.|||||.|||.|| 
Sbjct 1703  ATGAGTCCCAGAATCAGAGATTCTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTGCGACGGAGTTTCACTCT  1776

Query   15  TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCT  88
            |||.||||||.||||||||.|.|||..||||||||||||||.||||||||.|||||..|.|.||||||||||||
Sbjct 1777  TGTTGCCCAGGCTGGAGTGCAATGGTTTGATCTCGGCTCACCGCAACCTCCGCCTCCTGGGTTCAAGCGATTCT  1850

Query   89  CCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTT  162
            ||||||||.|||||.|.||||||||.||||||||||||.|||.|||||||||||||||    ||||||||||||
Sbjct 1851  CCTGCCTCAGCCTCTGAAGTAGCTGAGATTACAGGCACGCGCCACCATGCCCGGCTAA----TTTTGTATTTTT  1920

Query  163  AGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------------  219
            |.||||||||||||||.||||||||||.|||||||||.|||||||||.|||||.|.|                 
Sbjct 1921  AATAGAGATGGGGTTTTACCATGTTGGTCAGGCTGGTTTCGAACTCCCGACCTGAGGTGATCCACCCGCCTCGG  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  CCTCTCAAAGTGCTGGCATTACAGGCATGAGCCACCACTCCTTGCCGATCAGAGATTATTTTTATGATCCAAAG  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  GCCTGTCTTGTGGCCCTGAGTTTGTTCCAGATTCTTCTGTGTTGTATAGGGATTCAGAACACTGAGCCTGATAT  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  TATGGGCTCATAAGCAGCAGGTCAGGTTCTCCCACACCCACTGAGAGCAGCCCACGGCACATTTTCCCATCTGT  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  GCTTTGACACAGGGGGCTAGAAAGTGTAGTGGAAGAACAGCAAGGCAATCATTACAGCCAGACATCCACCCTCA  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  CTGCCACTGTCAACTTTTCTCCTCTGAAGGAACGCGCCAGAACGCACTGGCTGTGGGGAGGCGGCTCCCTTTCT  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  CCCAGTGCTAATGGAGGCGAAACATGCATGTCTGGAGACCAGAAGTAAGCCCGAATGGTTTAATTTGATTTTCA  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  CAGACACATTTCAAGGGAGTTTTAACTGGCTTTTACTTTAAAAGCCAGGAAATCCCATAAAATCAAAACAAATC  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  TTTATGGTGTAGCAACAGTGTGAAAAATATGCCACCAACAAAAACAGAAACATATGCTCCCAGGGTCTGGAATC  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  CAGATCCACGAAGAAGAAGAAGAGGAAAGTGAAGGAGCCACGTGGCAGGGACGGCAGACTAACCTGTTGGTCGG  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  TGACGGGCTTGTCCCGGAACGGCTTCGCCCGTCCATAGGTGGCCTTGATGACTTGACTTCTGAAGTGCTCCAGC  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  TGCAGCAGAGAGGGGGCAACAGTGTCAGGGGGTCAGCAGGGGCCGGCAAGTGGGGGCAGCGTTTCCATGGCAGG  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  GTGCGGGAAACACCACTTAGCAGGGTTTGCACGCCTGAATGACCATTCCGCGTTATCAGAATCTTCACCGCTCA  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  CGGGGAGTGGCGGGACCCACAGAAGAAAAGAGAACAGCAGGCTTTAATTACTTTTTAGGCACGCCTGCCTAACC  2956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2957  CGAACGATGCCTGTGGTCAGTGCACACACATGTCTCAAACCCTCAGAAGAGCCTCTTGCTGCCAATTATCCAAT  3030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3031  GGGAAGTCTGGGGCCGGGAGCGCTCTTCCGTAATTGCTAAGTTGGCACCAGACTGTGAAATAAATATTGAGGCT  3104

Query  220  --------  219
                    
Sbjct 3105  GTCAGTCC  3112

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