Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_148919.1
Aligned Length:
3113
Identities:
187
Gaps:
2898

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAAGAGAAAATAAGGCATTTGGGATGCCGATGTTAAAAGGAGAAGGTAATCAGAGAAGAAAAAAGGAAGTCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGAGAGTTCTGCGAAGATTTTGAAGATTTCTAGAGAAGCAGGGGGTTCTGGAGAAGGGAATAGACTTGGCCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATACCCAGGAAGACTTCCTCAACAGATGTCCCATCATGCTGAGATTCAACGCGACATTTTAGAGTCATGCAACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGTGAGAAAAAAAGTCCCAGTAACCTTTGTTGGGGCTGGAGGGCAGGATCCCGAGGTCCCGGAGGAGCTGCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACCTCCTCCAGCCAGGACAGCGCGTGCCTCAGGACGTCCAGCACCACCTTCTGGAGCCCCGAGACAGGTGGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCACCTGGAGGTGCTGAAGAAGGTCGACCTCCTTCTTCAGGTCATGGCTGCAACAGGATATTTTCATGCAAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCAAAGAGGTGAGATCATGAGGAGCCCAGGCCCTGTGGCCAGAAATAGCCCCTGACGTGACCTTCGAGGAACA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCGTTCTTGACTCTGCCACGAAGCAGGCAGCGCCACGTATTGGCCGCCTTGGGAGGACTCAGTTTTTTTCTTTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTAAAATTTTTATGTTTTGACAGGTTTTTTTTTAATACTCTAATTTGGACTTTTGATGGTCAAAGCGAACCCCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTAGGTCTATGAAACCCCAGAGCCAAAGTACCATCAACAGTTTGGCTGCAATGAGAAGCAAATGTGGCTACT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTTTTTTCCATTCGTCAGAATTCCTGCCAAGATCAACACACAAGCTGGTCGGAAAGCGTGGTTTCCTGATTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAAGAGTGCTGACAAGCCAGCATTTGCACAAACTCCCCAAACAGGAGCTGCTGATTTCCAGAGAAAGCAGAAGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CACCGCCTGCTCTGATAAGCCATGTCCCAGGGTGGGGGCCGCAGGGCTGTGGCCAAGTCCTCCCGTCCCTGCTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTCCAGAGTCAAAAGCAACGGTGTGGAAACCGCCTTTTGTGGCTGGGCCAAAACAAGAAAATGCAAATAAAAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAGGAATGTTTCTTTGGTTTCTCTGGAAATAACATAGGGGCTATGAAAACAATTTCTTTTTGGCTGGGGATGCG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCCGCTCAAAGTCAGTAATTGAAGATGCTCAGGCATCTTTTTTGGACACGCCAAGTTCTCCCGGGAGGCATTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTTAGGCCCTTTGTTTTTTCTTCTCCAACAAGTTTCTCCAACAAGAGGAAAAAGTGGATAGAAAAGCCAAGCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTTCTGCCCAACTTGCTCCAAAAAAGCTGGGCAATTTCCCAAATAAGCCGCACAAAAATTAGACAAAGAGACCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTGTGGAAAGCGTAAGGAGGGGCCACCTGGCAGCTGTCCAGCGACGTCCTCAGCTTCTCGATGTTCTCGGTGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCTCCTCCTGCTTGGAGTTGCTCAGCTGGGTCTCTTTCTGGAGGGTCCACTTTTTCTGCTGAAAATTGATGTTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCCTCAGTGACCTGGGTAATTTTCTCTATTAACTGGTGAGAAAAAGAAAAAGGAAAAAAAAAAAAAAGATGTAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CATACAGGGGTGGGGGGCCCTGAGGGAAGGGGAATGGGAGAGGGGAGAGATGCAACTTAAGTCCCTGTCTAAGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACGGGAGGACAGAGGTCCTGATATGTCTTGGTGATGGCTGTCAAGGGGGACGTTGGTCCTGTCACCAGGGAATG  1702

Query    1  --------------------------------------------------------ATGGAGTCTCATTC-TGT  17
                                                                    |.|||||.|||.|| |||
Sbjct 1703  AGTCCCAGAATCAGAGATTCTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTGCGACGGAGTTTCACTCTTGT  1776

Query   18  CGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCT  91
            .||||||.||||||||.|.|||..||||||||||||||.||||||||.|||||..|.|.|||||||||||||||
Sbjct 1777  TGCCCAGGCTGGAGTGCAATGGTTTGATCTCGGCTCACCGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCT  1850

Query   92  GCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGT  165
            |||||.|||||.|.||||||||.||||||||||||.|||.|||||||||||||||    |||||||||||||.|
Sbjct 1851  GCCTCAGCCTCTGAAGTAGCTGAGATTACAGGCACGCGCCACCATGCCCGGCTAA----TTTTGTATTTTTAAT  1920

Query  166  AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------  219
            |||||||||||||.||||||||||.|||||||||.|||||||||.|||||.|.|                    
Sbjct 1921  AGAGATGGGGTTTTACCATGTTGGTCAGGCTGGTTTCGAACTCCCGACCTGAGGTGATCCACCCGCCTCGGCCT  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  CTCAAAGTGCTGGCATTACAGGCATGAGCCACCACTCCTTGCCGATCAGAGATTATTTTTATGATCCAAAGGCC  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  TGTCTTGTGGCCCTGAGTTTGTTCCAGATTCTTCTGTGTTGTATAGGGATTCAGAACACTGAGCCTGATATTAT  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  GGGCTCATAAGCAGCAGGTCAGGTTCTCCCACACCCACTGAGAGCAGCCCACGGCACATTTTCCCATCTGTGCT  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  TTGACACAGGGGGCTAGAAAGTGTAGTGGAAGAACAGCAAGGCAATCATTACAGCCAGACATCCACCCTCACTG  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  CCACTGTCAACTTTTCTCCTCTGAAGGAACGCGCCAGAACGCACTGGCTGTGGGGAGGCGGCTCCCTTTCTCCC  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  AGTGCTAATGGAGGCGAAACATGCATGTCTGGAGACCAGAAGTAAGCCCGAATGGTTTAATTTGATTTTCACAG  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  ACACATTTCAAGGGAGTTTTAACTGGCTTTTACTTTAAAAGCCAGGAAATCCCATAAAATCAAAACAAATCTTT  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  ATGGTGTAGCAACAGTGTGAAAAATATGCCACCAACAAAAACAGAAACATATGCTCCCAGGGTCTGGAATCCAG  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  ATCCACGAAGAAGAAGAAGAGGAAAGTGAAGGAGCCACGTGGCAGGGACGGCAGACTAACCTGTTGGTCGGTGA  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  CGGGCTTGTCCCGGAACGGCTTCGCCCGTCCATAGGTGGCCTTGATGACTTGACTTCTGAAGTGCTCCAGCTGC  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  AGCAGAGAGGGGGCAACAGTGTCAGGGGGTCAGCAGGGGCCGGCAAGTGGGGGCAGCGTTTCCATGGCAGGGTG  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  CGGGAAACACCACTTAGCAGGGTTTGCACGCCTGAATGACCATTCCGCGTTATCAGAATCTTCACCGCTCACGG  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  GGAGTGGCGGGACCCACAGAAGAAAAGAGAACAGCAGGCTTTAATTACTTTTTAGGCACGCCTGCCTAACCCGA  2956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2957  ACGATGCCTGTGGTCAGTGCACACACATGTCTCAAACCCTCAGAAGAGCCTCTTGCTGCCAATTATCCAATGGG  3030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3031  AAGTCTGGGGCCGGGAGCGCTCTTCCGTAATTGCTAAGTTGGCACCAGACTGTGAAATAAATATTGAGGCTGTC  3104

Query  220  -----  219
                 
Sbjct 3105  AGTCC  3109

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