Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_149040.1
- Aligned Length:
- 5461
- Identities:
- 188
- Gaps:
- 5246
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTTAAGTCAAATTGTTTATGTAGACAGGAACCCAACAAAAATATTTGCCCAGGACCTTGCGCGCCCTAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCTCTGGAGAAAAGCATTTGCCTACAGAAATAAACCATTTCCTTCCTCAGCCTATATCAGTAACAAAGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGCTTTGGCCACTATCTGCCACTCCTTTCTCTTATTCCTCTGTTTGTTTAGAAGCGGATCAGGAAAGAGGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCATTTCCTCAGATCCCTCAAAGTCCCCAAAAAAGAACTCAATAAGCATTAGCTGTTATCATTTTTCAAGCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGGTTGTGTTTTATTTTCCGTTTTTCTCCTTTCCTTTCATTCCAAAAAGCCTCCTTTCTTTAATTCTATAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTTCTTTGGTCCCTGAGAGATTCTTGTTTGTTTATTTTTGTTTGTTTTTTTACAATTATTCCAGAGATCTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAATCTCTAGCACAGAAAAAAAAAATTCCCTTCCTTCTTAGCATCCTTCAGTAGTTGGACTCGGTGAAAATTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACTGCCCCCAGCCCTTTGCAGCACTGCTCTCAAGGCCAGTAGGCTGTACCTGGGCCCTGACTTGAGAGGAAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCACAAGAGAAGAGCATTCAGTGGGTTAAAAAAAACAGATCCGAAGGATGAAGGGAATCTACCTTCAGATTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGAAGGTCAAAGGTTCTAGGAATGAAGGTATTCAACATGGCAACGCTGGAAGCAAAGTAAACGTTCAACAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGATGATGATAAAGTAAGTGACCTTGAAACCAATAGGACAACATGGAGCTCATTACGATTATGTTTAGGGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGGAGGAGACATGGAATAGGGCTTATGTGCAATAAAACAGAGAGGAAAGGAGGAGGCAATTTATAAATGCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCCTCTGATTGTGTAAAATTAGGCATCTGTTAAAAAGACGGGAATGAGGTAATAATAGAGTTAACATGTTAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTAATTGGATAATAGTATTAGTTGTTTCTTTTCTCTAACTGAATATAATATATTACTTTTATAATTTAGTAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTTCTTTTCAAAGGAGGTACACCCATGCCTTTCTCCTGGCTATCTGCAGCTCAACAATGAGGGACTTGGGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCCAGGCCTCCATCACACTAAACAGTCCTGGCCGACTATGATACCCTTCCTCTTTTCTCCCTAATTTGTTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTACAGTTTGCTCCGTGGACGTGTGAAGCAATCTCTGGGGGTGGAGCTGAGGAATCTGCATTATTAACAGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTGGGAGATTCTTACACACACTAAAGTTTGGACAAAGATTGCTTATTTTTTCTGCCAAAAATCTTAACCACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGGACTTGCACGATCTATGTTATTTCTTGAAGCAAAGTTAATCCACCGATATTATGCCTTGTGTGTATGTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTAAGTGCCCAGTGAACACAGTTCCATTTATCCTCAAATATTTTTGTGTAGAAATTTTCGATTATAATTTATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATGGTTTTTGCTTAGAAAGCCACCTTATAAGCAAGGTATCCTGTCATAGGATCACTACTTTCTTTCCCTCTGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTGAGTCCTGCCATAATTAGGGCTGAGTGACTTTTCGGGACACACTTTACTTTGTTTCTTTGATCACAACAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACACAGGACTCTCGGGTCCTGAGGCTGGCTGAAGGGTTTCAGTTTTCCTTAATTGTCTATCATTATAGGACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGAAATACCCACTCATGATCCCACTGCTTCCAGCCCTCAAACTAAGAATGGAGTCTCTAGTCGTGCACATTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGGCCTCAGGGCTCACAAGGCAGTGAGGCTGAGGTGGGGCGGCCTGTCTGCGTCTGCGTCCCAGCAGAGCCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAGGTCCTCGCTGGCACTGCAGGAAGGAGGCCCCTCTGAGGCGAGGAGTGTTCTGACCTACAAGGCTGTCCAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCTTTTGGCTTCCCTGGGCAACATTGGAAGGAGGAAAATTGTCTTAGGCCACACATAAAATACACTAATGATAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGATGAGCTTTAAAAAAAAATGCAAACAAATTTCATAATGTTTCAAGAAAATTTATGAATTTGTGTTGGGCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATTCAAAGCTATCCTGGGCTGCATGCAGCCTGTGGGCCATGGGTTGGAGAATCTTGCTTTATGATTTTACTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGACAGAAACTAAGTGCTAACATTTCCCCCAATCACAATTCTATTTTACCTTTTTAAAAACTCTAAAGGGCAAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AATTTTGCTAATCTTTTCTAGAAATATAAAAACAAGCAAATATGTTTTCTAAAACAAACCAAGGCTTTTCTCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGGAATTTGCAGGCATAGCACGAACTCCTTCCTCACTGCTATTTCTTGAGAGGGGCTGTTAGGCTGTGCTGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTCTGCTTAAGGACGAGAGGCCAGGTACACAGCCTGAGAGGCCAGTCATTGTGCCATGTTGTTGTCAGGAGTTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCAGTGTCCATCTTGATAAGGCTTTGCTAAAACATACTAATACAAACTTCCATTACCTCCTGTGTTTCTAAATA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACATACCAAGTTATTTTAAGACTCATGTTTTCCTTTATAATCATTTGAAATTTCTGCCTAGTGTGAAACAACC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATCTAGATTCTCACAGAATTCATGAATAATACTGAAATCCACTCTCCTAAACAGCAGCAGTTTCAAGTAAGTCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCAGTAAACACAATGTCCAAATTTATTTTTAAAGCTTTGAAGATAAATGATGAAGCCTCCTATGAGATTATCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTATGTAGCGGAAGAAAAGAATCCTTGAGGGTCAAGTTGCTAGGGCAGTCACAGAAGCCAGAGCCATGGGCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGAGGTCCTGAGGCCTCTCTGAAGGATGTGCGTGGTCATCCACTATGGGTGCAGCTGGTGTTGAGAAACTAAGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGATGCACCACCTCTGTTGTTCCAAGGCTAGACCAACAGTGGGCATTCTCTAGATCTATTGTCTCCTTTACGTA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTAGGGGGAAAACCACTTCTACTGTGCAGGGATCTGCCCCTTTAAACACATAAATACCACTTAATCCACTGCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCAACAGAGGAAATGACCACTGGCCTGGAGGCCTCCAAAATTCCTTCTCTTTTTCTTTCTTTCAAGTCAAAGGT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CATGGTTCATTTCGAGTTCCAATGCTATTTTCTAAATTTTGTTTTAATCCAGATCTCATGACTTATTTCTCATT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTCTTTCCTTCCTGAACAATTCAGTGCTAAAACCATTAGGTAGGGCAGAGCGAAGACTGTATGGGCGCCAGGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GAAGGAAACCACAGTGGCACAGAGTGCAGTGCCTGCATCAGGACAGGGTCAGGAGGCAGTCCTGCAGAGGGGCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCTCAGCATGGTGTGTTCAAGTCCTACAGAGTATTGGAGCCCAAAGGAGAAAAGTAACTTTACAATGGGAATGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGGCAGACATCACCTGACTCAAGTGTCAAAGTGAAGAAACATCATCAATGATGTTTCCATTAAATGGAAATCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGTGCCACCTGACAAGAGGCATTTAGGACTTCTGTGATATTCCCTCTAAAGATGCATCACCTGAATCTGACTAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAAGAAACATCAGAAAAACTCAAATTGAGGAACACTCTGCAAGTTCCCTCAAAACCCTGGCAATGGCAACTAAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AAGATGGCTTTTGTGAGAAGAGCGATTGGTGTCCACACCTGCTGGTGCTGAGCACAAGACAATGCACATGTGTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTCTTGAAGGAAGAAACTTTAGAAACGTCATCTTCAAGGTGTCAATGACTTGTCTACTATAGCTGCTGCCTCAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CGTCCACTTTTAGACCCGGCATCAGCTGTGTGAAACCCAGTCGCACCCTGCCACCTTTGGTCTAGGTGTGACTT 3848
Query 1 ------------------------------------------------------------------ATGGAGTC 8
||||||||
Sbjct 3849 CTCTTCCTTAGAGGGGCATGATAGAGCTCGTGTGTTTCTTTTCTTTTTTTTCTTTTTGTTTTTGAGATGGAGTC 3922
Query 9 TCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGC 82
|..|||||||.|||||.||||||||.|||||||..||||.|||||||||.|||||||||||| |.||.||||||
Sbjct 3923 TTGTTCTGTCACCCAGGCTGGAGTGCAGTGGCACCATCTTGGCTCACTGTAACCTCTGCCTC-CCAGTTCAAGC 3995
Query 83 GATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGT 156
.|||||||||||||.||||||..|||||||||||.||||||||....|.||||.|||..||||| |||||||
Sbjct 3996 AATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGAACCACCACGCCTAGCTAA---TTTTTGT 4066
Query 157 ATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------- 219
||||||||.|||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 4067 ATTTTTAGCAGAGATGGGGTTTTACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACTTG 4140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4141 CCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCATGCCTGGAGGAGCCCATGTGTTTCTCATCTC 4214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4215 ACCAACCCAAAGCCCAACTCACTCCACAGCTGCTGACCATGAGGAAACCTAAGGTCAACACCGGAGTCAGGCAA 4288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4289 ATAAGCCACCCCCCCACCCCCACCCGCATACACACTTGTTTTATTTAAACTGGCCAATCCACAACTGCCAGAGG 4362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4363 AAAGCCCGTGGGCCTTCATGGAGGCCTAGTCTCAAGCCCTCACTCTCCCTTCCCACCTGCCGGTCGAGTGCCCT 4436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4437 GCTGTCTCTGGACTTCCCATCGGCCCTCAGGGACGTAAGTCTGCCTAGAGGAGAGTTGACACACCAAAAACAAA 4510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4511 ACTTCTGTTTCAAAAATCCAGTCCCTGAAGGCAATCGGGAAAAAGTGTGAAGAACAAGGGCAGAGCTTCCCAAC 4584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4585 TTTGAGCCTGAGTGGTGAAAGGAAGCAAGAAGAAAAGGGGTTTGTGGGTGCTCGGAGGAGCCCCACAACTATAC 4658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4659 CCCCATCCTCTCCAAGATCCACCAGAACAGATACCTACATAAACTAGAGGCATTTGAGAACGAAGGCCTCTTGC 4732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4733 CCCCGAGGCAGCAGTAGCAGACTTGTATGGCCCACATGTATTAGTCTGTTCTCACACTATTAAGACATACCTAA 4806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4807 GACTGGGTAATTTATAAAGGAAAGAAGTTGAATTGACTCACAGTTCAGAATGGCTTGGGAGGCCTCAGGAAAGT 4880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4881 TACATCATGGTGGAAGTGGAAGCAAACAGGTCTTTCTTCACACGGTGGCAGCAAGAAGTGCCAAGCAAAAGGAG 4954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4955 GAAAAGCCCCTTATAAAACCATCAGATCTCATGAGAACTCACTATCACGAGAACAGCATGAGGGTAAATGCTCC 5028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5029 CATGATTACATTACCTCCCACCAGCTCCTTCCCACCACATGTAGGGATTATAGGAACTATAATTCAATATAAGA 5102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5103 TTTGGGGTGGGGACACAGCCAAACCATATCAGAGGATGAGCTAGGGGTGCACAGGGGGAGTAGGCTGTGAAGGA 5176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5177 CATGTAGTACCCACATCTCTAGGCCTGCAGGTGCCTTTCCGACAGGAACAAGAGGAACGTGGTAACATTCCAGT 5250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5251 GTGGCCTGGCCAGCAGGCACAGCCAGGTAATGTATGGCGCAGCAGGCACCAATGTGGCAGGGGAGGGCCACGTG 5324
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5325 CTCCTGTGTCTACCCCAACACAAAGGTGCTTCTCCATAACCACTCCTACCCGCCTCCCCCAAAACTGGCTGAGT 5398
Query 220 ----------------------------------------------------------- 219
Sbjct 5399 TTAAGTTTCTGCAAACTGGCAAAATGAGGGCTTGAAATAAAAATTGTCTGTGGACTAAA 5457
