Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_152444.1
Aligned Length:
2390
Identities:
190
Gaps:
2172

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TATTTAAAGGGGAAAGAGGCCGCGGCGCCGGCCCCAGGACCCGACCCGGCCCCAGGAGAGTGTGCTCGTTCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCACGGAGCTGGCCGCGTTAGCGACGTCCTCGAGTCCGCGGCGGGCACGATGCAGCTCTTGTGCTCTACTGTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAGATCAAGGACATTGGCCACCTGACCCGTTGCACGTTGTAACCGAGGAACTCGGAAGCTACAGCCGAAGGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGTGGGAGCTGCAGCCTCGCGGGGGCTGATGTCAAGACTACTCTCTCTCAGATCCCAGGATTGGCATGTGATGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGATGAGCCGAAGGCAGGAGGGAACGCCCTGGGAGGTGTTGATGCTGAGTTGGGGAGGCTCCTAGACGAAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCGCCCCCATCTACTGACTGTGCCAGTCTTACATTTTCAGGATGGAGTGGCCAAGGGATGATATAAACAAAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACGTTACCGTGGGAAGAAGACAGACTGTTTTCTTAGCTGGGACGTTGGCTTTTGTCCAGGGTGGCTCTGGTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTGGGAGCAACAGGTCCCATTTTAGCAATTCTTTGTCAATGGTTTGAATTTTTTTTTTTTTTAAGATGGAACGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAGAGAAGAGGCTAATTTTCGCGTCATGTTAATCTCACTTCTCTGGCATGTAAGGGTGCTGGTATGCCTGCTGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCCCCACTCCCAGTTCTGTGTTCCAGAAATTGAGATGGCTCCCTGCCTGTGACTATGATTAGGAGCCTTGCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CATTTCAGAATCTCCCTTCAACCTGCTAGGGCAGGTATCAGAAATTCCAAAGGGCATTTATGTGAGGCACCTAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTAGAGCCTATCAAAGTAGGAAGGGAGAGCCATTTGAAAGGCATCATATTTCAAACTTTTGCTATTATCTGTGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TATCTTTACAGTCACGGGAACACACTAGCGCTACTGAAAAGATACTTATACAATTTTAAGTGTCTTTAAAATTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGTCCCATAATGGGACATCACCTGTTGTATATATGCCATGTATTCTATTTTAGAATCCTGTATCTTATGACCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TAAAGTCATAGTCAAGGACCAGCAGTGTTGGTGTACTGTCAACGGAAGTGCACAGTCTCACTCTAGGATCCCAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCCAGACTTCCTGAATCAGACTCTGGCAGGGTTTTTTGTTTTTTTGTTTTTGTTTTGAGCCAGAGTCTCACTGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAGCCTCCGCCTCCCAGGTTCAAGCGATTCTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGCCTCATCCTCCGGAGTAGCTGGGATTACAGGCGCCTGCCACCACACCTGGCTAATTTTTGTATTTTTAGTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGATGGGGTTTCGCCATGTTTGTCAGGCTGGTCTCAAAACTCCTGACCTCAGGTGATGGCGCCCACCTTGGCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCCCAAAGTGCTGGGATTATAGGAGTGAGCCACCGCGCCGGGCCAGACTCTGGCATTTTAACAATCCCAGGTGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGTGTGTGCATGTGAAAATTTAAGTACCATTGGTCTAGATCCTACACTCTTTAGGATATCACCATCTGTAGGTA  1554

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct 1555  GAATATTTAAAGCATAATAGGTATGACTGATAGATTATTTTATCCAAAGTTCTTTTTTTTTTTTTTTGAGATGG  1628

Query    5  AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTC  78
            |||||...|||||.|||||||||||||||.||||||.|||||||||||||||||||.|||||||||..|.|.||
Sbjct 1629  AGTCTTGCTCTGTTGCCCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGTTC  1702

Query   79  AAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTT  152
            |.||.|||||||||||||.||||||..||||||||||..|||||||||.|.|.||||.|||.|||||| |||||
Sbjct 1703  ACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCCACCACCACGCCTGGCTAA-TTTTT  1775

Query  153  TTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------  219
            ||||||||||||||||||||||||||||||.||||.||||||.|||||||||.||||||||||||.|       
Sbjct 1776  TTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCC  1849

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1850  TGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCACGCCCGGCCCCAAAGTTCTAAAGTAACAT  1923

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1924  TCTATTGCTAAAGAAATCCTAACCTACTATGTAACATTTTTCTCTTAGTTAAAAATGTGAACTTATTATTAACC  1997

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1998  TCAATTTTTTAGAGGCCTCCAATCTTTTTAAAATATAAATATTTTTGATTGACAAATCATAATTATACACTTAT  2071

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2072  GGGGGTATAAACCTCAATTTTTGTAACCCTATTTTGGCATTTTCCTGTCCTTACATCTCAGCTTAAATGCTCCC  2145

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2146  TCTTTTGGGAGGCCTTTTTCTGCCTTCAACATAGTAGAGCCTTTTCCCCCACCCCTCTGTAACATAATGCCCTG  2219

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2220  TTTTATTTTTACTGCTTTTATTTTCATGCTTTGTGGGTGTCCCCACTGGAGTGTAAGCCCTATGGGAGCAAGGG  2293

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2294  CTGACCTGTGACTGTTTTATCTCCAGGGCCAACAGCAGTGTTACTGTATAGTATGTACTCAATAAATATTTGTT  2367

Query  220  ----------------------  219
                                  
Sbjct 2368  GGCTTTATCTCTTATTTTTTAA  2389

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