Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_156699.2
Aligned Length:
3490
Identities:
187
Gaps:
3277

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCGCGAGCCTGCGTTTTCCGGCCAGAGGACATGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAACCATCAAGATGAGAAAAGAAACAGAGGCTAGGAAAGTGGTCTTAGCCTGGGGACTCCTAAATGTATCTATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGGAATGATATATACTGAAATGACTGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTATATTGAGCTTGCCCTTGCATCTCTCTTCAGCCTTAATGCCTTATTTGATTTTTGGAGATATTTCAAATATA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGTGGCACCAACAAGTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGGGAGCCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GATTCTACCTCTCCTTCCAGCAGTCCTACTTTCTGGAACTATAGTCGTTCTATGGGGGATTATGCACAAACTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAGAAGTTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAGATGAAGCCGATCTCAGCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTAAACAAGCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAATAGACAACTTCTTGATCATATGGATTCATGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACAGCTAAATTTAGAAATTGGATCAATGAGACAATATTAGTGCCACTTGTTCAAGAGATTGAGTCTGTCAGCAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACAGATGAGACGAATGGGTTGTCCAGAGCTACAGATAGGAGAGGCTAGTATTACTAGCTTGAAACAAGCTGCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGGTTAAAGCGCCTCTCATTCCGACTTTGAACACAATCGTTCAGTATCTAGACCTTACTCCAAATCAGGAATAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTGTTTGAAAGGATCAAAGCTTTTAAAAATTTCACCTTGTTGCCACAGAACTATCTCAGGGAGGTTGTATGAGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CATCATGCATGTATTTTGCACCTACCTTGATTCCAGATTACCTCCACATCCGAAGTATCCCGACGGAAAAACTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTACTTCTCAGCACTTTGTTCAGACACCAAATAAACCAGATGTTACAAATGAGAATGTTTTTTGCATTTATCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGTGCTATCAACCCTCCCCATTATGAGCTCATCTACCAGCGTCATGTATACAACCTGCCAAAGGGCAGAAATAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TATGTTTCATACATTGTTGATGTTTCTCTACATCATAAAGACCAAAGAGTCAGGAATGCTTGGGAGAGTTAATC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTGGTCTATCTGGTGTGAATATATTGTGGATCTTTGGCGAGTAGCAAGTCATATATTTAATTCTGACATTTAGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTATTTCACTGAACCAGAAGTCGAAACTAAACATCTCTGAGCCACTGACTCTTCTGAAATAAAATACACATGGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGTATGTTACAGACTCTTTAGATTTAACAGAAAATGTAGCTGTTATGAAATGTAATTGTAAAAATATGTCCCGT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATCTTCTATATCGAGACATTGCCTTTAATTTTATATCGCTTTTCAGAAATTTCAGTTGACTACAAAACTGCAAC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTTCGGATTTTTATTGACTCAAAATAGTGCCATTCCCCTTAATGAAATAGATTTTGAGTCTTTTTTTCATTGT  2072

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |..
Sbjct 2073  AACCCCCAAATGAGAATCATCTACCTGATTCTTGTACCAAAAAAAAATTTTTTTCAGTCTTTTTTTTTTTTAGA  2146

Query    4  GAGTCTCATTCTGTC-GCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG  76
            |||..||  |||||| .|.||||||||||||.|||||||.|||||..|||||||.||||.|||||||| |.|||
Sbjct 2147  GAGGGTC--TCTGTCAACGCAGACTGGAGTGCAGTGGCACGATCTTAGCTCACTACAACTTCTGCCTC-CCAGG  2217

Query   77  -TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTT  149
             ||||||.|||||||||||||.||||||.|||||||||||||||||||||..|.|.||||.||||.|||||   
Sbjct 2218  CTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAA---  2288

Query  150  TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----  219
            |||||||||||||||||||||..||||||||||||||||||||||||||||.||||||||||||||||.|    
Sbjct 2289  TTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCCCGAACTCCTGACCTCAGGTGAT  2362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2363  CCACCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGTGCGAGCCACTGCGCCCAGCCTCAGTTATTTTATTT  2436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2437  AACAGTGTAAGTACTTAGAAAGTAAGAAAATTGCTGATTTAGTTTTTTTTTTTTTTTTTTTAATGTTTCCCCAG  2510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2511  CATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAAATGAGATTAACTCTTAAGTAATGTATTAAGTTTATGT  2584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2585  ATATTTTAAAATATTATTAAAGGAGGTTTGAAAGTATTGACATTTAAAAAGTCAACACTTAGATTAAATTTAGC  2658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2659  TGGTAGTTTTAATTTGGGTTTTAGTTAAGAGTGTGAGGACATCAGGAAAACTGTTTACTACTTTGGTTTTAGCA  2732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2733  GCTCAGTTTTACTATTCCATAATGTGTTATTTTTAAAGTTCTCTTTTTAAGATCACAGTGATATCCTATCTTCA  2806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2807  AATTTTTTAAATATGTTCAAAATATCTGGAGGGTGAGAAGTTACCAAGTTTGTATGTTTTGTTTGACTCACCAT  2880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2881  CTTTATTTTCTGTATATGTAGTAGCTGGCAATTGCATATATTTTCTTGATTAACATATTAGAGACTGCTTCCAT  2954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2955  CATCTTATGTAAACCTGGAAACAGCTGAAACTAGTCTTTTCTGAAGAACCGTGTATCAGTGTTAGATGTGCATC  3028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3029  CCGTTTTGTCATTCCCTCAGACTTTGAATACAGTCATTACTCTCTGGAAGAGAAATGTAAGTATATTTTTTGTT  3102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3103  ATCTGCAGTATGGTTTAACATGTATTAATAATACACATATGCAGACTCACTAAAGTATCCCCAGTAATTAGTAA  3176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3177  ATTCCAAATTTAAGTCAGTACAGTTCTGTATTTGTAAATTCTGTCTTTCAAAAAGTTGTTCGTGTTTTTAAAAG  3250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3251  TTGATGTCCAAAGGAAAGGAGCTTCTTTTAAGTACTTTTGGTGTATGTTGAATATTTATTTGCTATGATATTCT  3324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3325  AGAAGAAAATATCAAACATGTTAAATATAAGAACATGTTAAAATTTAAATTTGCTATTTCAAAAGTTACTGAAG  3398

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3399  ATGTCTTGGAATAACAATTGTCATGCTGTTAAACTAGTTGCATATACTTCATTAAAAGCACCATGGAGAAACAT  3472

Query  220  ------------  219
                        
Sbjct 3473  TTTAACAATGCA  3484

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