Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_157408.2
- Aligned Length:
- 3841
- Identities:
- 189
- Gaps:
- 3625
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGACAGAAGCGTCAATTCCTGGGAGTAGTTCGTTGGTTTTCTTTCCCCTCATCCTTTTGCCTGCTCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGGTGGCTTTGATTTCGGCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGTCTTTATCTGCAAACTCTAGTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATGTTTGAGTTTGTCTCCCTGTGGAGCAGGGGTCCCCAGCCCCCGACCCCCGCATCGGTCCATGGCCTGTCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAATTAATGCAAAACTTCATGATGGAGTATGTCAGCGCTG 370
Query 1 ------------------------------------------------------------------ATGGAGTC 8
||||||||
Sbjct 371 TAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACCTAAAAAGTGATGGAGTC 444
Query 9 TCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGC 82
||..|||||.||||||.||||||||.|||||||.|||||.|||||||..|||||||.|||||.|..|.|||||.
Sbjct 445 TCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACCACAACCTCCGCCTCCCTTGTTCAAGT 518
Query 83 GATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGT 156
||||||||||||||.|||||..||||||||||||.|||||||.|||.|.|||||||||.||||| |.|||||
Sbjct 519 GATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCACACCACCATGCCCAGCTAA---TCTTTGT 589
Query 157 ATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------- 219
|||||||||||||||||||||||||.|||||||||||||.|||||||||||||||||||||.|
Sbjct 590 ATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCCGGTCTCGAACTCCTGACCTCATGATCTGCCTGCC 663
Query 220 -------------------------------------------------------------------------- 219
Sbjct 664 TCAACCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCATCATGCCTGGCCTAATTTGTATATTTCTAATGACTC 737
Query 220 -------------------------------------------------------------------------- 219
Sbjct 738 ATGATGTTGACTGAGCATCTTTTCTTTTCTTTTCTTTTTTTTTTTCCTTGTTTTTTGAGATGGAGTCTTGCTCT 811
Query 220 -------------------------------------------------------------------------- 219
Sbjct 812 ATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAGGTTCAAGTGATTCTC 885
Query 220 -------------------------------------------------------------------------- 219
Sbjct 886 CTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACACCACCATGCCCAGCTAATTTTTGTATTTTTAGTA 959
Query 220 -------------------------------------------------------------------------- 219
Sbjct 960 GAAACAGGTTTTCACAATGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTGATCCGCCCCCCTAGGCCTCCC 1033
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1034 AAAGTGCTGGGCTTACAGGCATGAGCCACTGCACCCAGCCGACTGAACATCTTTTCATGTGTTTATTAGCCAAT 1107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1108 CCTATATCTTCACTGGTGAAATGTCTATTCAGATGTGTTGCCCATTTTAAAAATTGGGTTGTTTTCTTACCATT 1181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1182 GAGTTATGAGTCTTTTATATATATTCTAGATACAAGTCCTTTATCAGATATAATTTGGAAATATTTTCTCGCTG 1255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1256 TCTGTAATGTGTTATACATCAATTTTGAGATATCCTTCACATTAAGAAACTAACGGTGTGGATAATAATCCTGG 1329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1330 TATTGACAGAGGTTTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCACGCCTGGGCACATACTGCATCATTT 1403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1404 ACAAAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTATAGATTTTTAGAATTGGAAGGCATGTAAA 1477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1478 GAACACGTAATCTGGTACATTGCTTCAGTAGGTAAGTCAGTATGAACTTCTAAGAATTTTTGTTTTCTTCTGTA 1551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1552 TTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAAGTGGCATCCCCTGAGATAGTGACTGAA 1625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1626 ATGGCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGTAATAGGATATATGTATGTATGTACTTGTGTCTCTG 1699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1700 TATGTATGTAAATAAACAAACATGCTGGAAGGAGGAGGTGATTCAATCAGGGACTTTGTGAAAGAAAAAAAGAA 1773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1774 TAACTGGACCTTCCTTTAATGATGAAAACTGTTTATACAGCAAACCATCAAAGCCAAAATGTGAATTTTGGTAT 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 TAGCCCGATTTTTCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACC 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 CTCTTTGTTTTGTTCTGTTTGGGGTTTCTTCCCCCTCAAGTTGCTCTTGTCCACCACTAGACTGGCTGCCTTTT 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 ATTCCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAAAAATTAATCTTCATCAGTTTTTTTCTG 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 CAGAAAACAGTTTTTTAAATATCTTACATGAGAATGCTCTGCACCTGCAATCTCTGGTTGATGCAGTTTCCTTT 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 CTCTCTTCTCTGTTCCCATTGGTAGAATAAATCTGCTCCTTCTTAAATCCTGAGCTGAAAATGTCCACACTTCC 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 CAGAAGTGTACTTTAGAATCACCTGTAACATGTATTTAAAATACAGATTCCCCAGCTCCACGGGCAAAGCTCTC 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 CTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCA 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 AGCTGCCAGGGTAGTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGGACAGGCTCACACCCAGCCCCACAGC 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 TGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGCCAGC 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 CATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTTAGGAGTCATGGGAAAATACACCAACAC 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 AGTAAATCTTGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTGGGTG 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 ACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTGGCTGGAGGAGGGGAGGAGAGA 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 GAGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAATTCCACAG 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 CCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGAT 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 GTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACCTCTCCAAACATCTATTTGTTTTACA 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 TTTTTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAACATTCAGCAGTATCCAAGCTTAGATA 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 TATCTGATGAGAGGAAAGTAATTGTGAGGCCTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTC 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 CAGCAAATTGCTTCAACTGTCTGGCCTGCAGTTTTTTTCTTGCGTTAAATAACAGACTTAGTCTAGATCGGTGG 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 TTCTTATCATGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGCAAATTCTTGGG 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 CTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAATCTGTGTTTGAAACGCGATTCTGATT 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 ATTTGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGG 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 GCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAAATGGTTTCAGATGGGGACCA 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TTGTTATGCGGTTATAGCCGACGCCTAGGTGCTACCTGAGGTCTTCAAAGCTAAAGGTCAGTGTTTCCCAGCCG 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 TAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTATAATAGAGAAGAAAAGGCATTTTCA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 GAACCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTTAGCTTCTGATAAGAGATTATTTTGTTATT 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 TTAATCTGAGTGCAATTTGCTAAATATTCATTTGCAACTTGTTAAATTTATTCAAAGAAATTAAATGCCCATAA 3771
Query 220 ------------------------------------------------------------------- 219
Sbjct 3772 GTGACAGAAAGAATAAAGAATTGTGATATATATTTACAATAAAATACTCTTTAGCAATAAAAAGAAA 3838
