Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- NR_160526.1
- Aligned Length:
- 3172
- Identities:
- 193
- Gaps:
- 2958
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCT 2368
Query 1 ----------------------ATGGAGTCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGG 50
||||||||| | |.|||||||||||.||||||||.|.|||||.||||||||
Sbjct 2369 TTATTTTCTTTATTTTTTTGAGATGGAGTCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGG 2441
Query 51 CTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGG 123
||||||||||||||.||||| |.||| |||||.||||||||||.|||.|.||||.|||||||||||||||||||
Sbjct 2442 CTCACTGCAACCTCCGCCTC-CCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGG 2514
Query 124 CACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTG 197
|||..||.|||||.|||.||||| |||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 2515 CACTTGCCACCATTCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTG 2585
Query 198 GTCTCGAACTCCTGACCTCAAG---------------------------------------------------- 219
||||||||||||||||||...|
Sbjct 2586 GTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCA 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 TGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTT 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 TCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 GTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAG 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 GCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAA 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 TTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAG 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 ATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTAT 3103
Query 220 ---------------------------------------------------------------- 219
Sbjct 3104 ATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 3167
