Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_001738632.2
Aligned Length:
3972
Identities:
194
Gaps:
3759

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCCCGGGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCGGCCGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAAGGTCTCGCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCTCACAGGCTGGAGTGCAGTGATACGATCTTCACTCACTGCGGGTTTCCAAGTAGCTGGGAGTACGAGCAC  666

Query    1  -------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGA  25
                                                             |...||||||..||||||.|||||.
Sbjct  667  ACACCACCACACCTGGCTAATTTTTAATTATTATTATTATTATTTTGAGACACAGTCTCGCTCTGTCACCCAGG  740

Query   26  CTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTC  96
            ||||||||.|||||  ||  ||||||||||||||||||||||||||| |.||| ||||||||||||||||||||
Sbjct  741  CTGGAGTGCAGTGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTC-CAAGGTTCAAGCGATTCTCCTGCCTC  811

Query   97  GGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGA  170
            .||.|||.||||||||||||||||||||||||||.||||||||.||||||   |||||||||||||||||||||
Sbjct  812  AGCTTCCTGAGTAGCTGGGATTACAGGCACACGCCACCATGCCTGGCTAA---TTTTTGTATTTTTAGTAGAGA  882

Query  171  TGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------  219
            .|.|.||||||||||||||||||||||||.|.|||||||||||||||||                         
Sbjct  883  CGAGTTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAA  956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  957  AGTGCTAGGATTACAGGCATGAGCCACCGCGCCCAGCCAATTTTTTGTAGAGAGGGGTCTCACTATGTTGCCAA  1030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1031  GGCTGGTCTCAAACTACTGGGCTCAAGTGTTCATCTCACCTCAGCCTCCCAAAGTATTGGGATTACAGGTGTGA  1104

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1105  GCCACTGCACCTGGCCCTGTATGTTTTCTTTGGAGAAATGTCTGTTCACATGGTTTGCCCATTTTTTAATTGGG  1178

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1179  TCATTTGAGTTTCTTACATATTCTGGTCATTAACCCTTGTCAGATGTGTGGTTATTAACAGCCTTTTAAAAAGT  1252

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1253  TTGTCTGAGAGTCCTTTGTTGGCCGCCTTCCTAACTGAAGTCTTCTGTCTACTTATATGATTGAATTCTTTTAT  1326

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1327  TTAAATGATGATTTAATCAACAACTATTTATGTGGTGTCTGTGTGTAAAGTCTTGGTTTATCAAATGTGTCAAC  1400

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1401  AAAACATTTTATAGGATTTGGCCTCTGCCCTTCAGGGGCTTGCAGTTTAGTTGGAAGGTAGACCAAAAAACTTC  1474

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1475  TATGTCAATATGTGCTAAATGCAGAATGTGTTAGCAGAGAGTTTTGACAGGCTGGTTTTGGGCTAGGAAAGGCA  1548

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1549  TGCCTTGAGCTGCAGGCAGTGGTCTTCTCTAACTCCCAAGTCACGCCACTCCCTGCTCTTGTGTGTCGGTTTAA  1622

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1623  ACTGTTACTCCAATTTCCTAAATGTTTACTAAGTAAAGGGCTATGGCACACAAATAAACTAAACAAAATAGTTC  1696

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1697  TAGTTAGACCCTTGGAAAAATCTTCCCCTTTTCTGGGCCTCAGTCTGTTTATCTATAAAATGCAAGGATAGAAA  1770

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1771  CCAGTGATTCGAAAACATTTATTGTTTGTTTTTTGAGACAGAGTTTCGCTCTTTCGCTTAGGCTGGAGTGTAGT  1844

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1845  GGCATGATCTCGGCTCACTGCAACCTCAGCCTTCCGGTTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGC  1918

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1919  TGGGATTATTACAGGTGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAATAGAGACAGGGTCTCACCATG  1992

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1993  TTGGTCAGGCTGGTCTCGAACTTCTGACCTCATGATCCACCCGCCTCAGCCTCCCGAAATGCTGGGATTACAGG  2066

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2067  CGTGAGCCACTGTGCCTGGCCAAAACATTGTTTTTAATTAGTGGGAGCCTTTCTTTAAATAAAACTACCCAGAT  2140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2141  GCTCAATTTGTAAATGAGAGTTGCTTTTGGAGGGTTGGGGGTTGCAGGTTAGCACAGAGACAGTGGAAGGGAGC  2214

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2215  TCAGTCTCTCCGGCCTTCCGCAGGCAGCGCTCGAGTACCTTCTAGGTACCTTCCCTCATGAGCAGTTTCAAAAC  2288

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2289  CATTGGGCCATTGGGGTAGGATGCATGGCTGTTTTTTGTTTTGTTTTGTTTTGTTTTTGAGACGGAGTCTGGCT  2362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2363  CTGTCACCCAGGCTGGAGTCAATTGGCGCAATCTCAGCTCACTGCAACCTTTGCCTCCCAGGTTCAAGCGATTA  2436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2437  TCTTGCCGCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACTACACCTGGCTAATTTTTGTATTTTCAG  2510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2511  TAGAGACAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGGCATGGCT  2584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2585  AGTTTTTATGTAATTATGAAATACAGCACTATTTGGTTTTCTGTACTACCAAACTCTGTCAAGAATAGTTAATA  2658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2659  TATGTTGTTAAAAAAAGAATAAAAATAATTTAAAAATAATGGTTAATATATATTGGGATATTAAAAGGGAAAGA  2732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2733  CATTATTAGCTAAGCCCCAAAATGTCCGAGAGGCAAGTTACTTATTGCTGCAAGTTTTCTTTTACAGCAAGAAT  2806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2807  AATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGCTTTAAATATAT  2880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2881  GGGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAATGATGGATACATTATTCCTTCACA  2954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2955  CAGTGGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTTGCTAAATTAAGGTCTTTTATAAATTTAGTA  3028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3029  AATCAGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGAAAGAAAGAGCCACTTAAATTCTTGTTTAAA  3102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3103  AATACCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGTAGTGCTCAGACATCTGCAGTGTTGAGGCCA  3176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3177  GTCACTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTTTGAGCCTTACTCTTAAGTTCTCTATGAAGA  3250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3251  ACTACATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAATCCTCTCCAGGACAAAAATGAACATGAATGG  3324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3325  AGTGGCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAATGACTAGGGTTCACTTTCTGGGACTGATGTT  3398

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3399  TAATTGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACCCGCATGTGCTCTAGCAA  3472

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3473  GGATACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACCAAAACAGTCCTTCAACTTTGCACTGTGCCT  3546

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3547  TAAGTAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCTACTTTCGATGAGGAAATCCCAGTAAGCTTT  3620

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3621  CTGATTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTATAGAATTACCACTGTTGGAATTTGGTACAA  3694

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3695  AATATGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGTTAGGTAGGTTCTGTCCAGTTCTTAGGGACT  3768

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3769  TTTTTCACATTATAGCATTTTTACCCTAAACATGATGTTGAGATTATTATATACTGTATTTTCTTCTAAATTAA  3842

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3843  CCCTAATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCATTGTTTTGTTAGATGCAGTAATGATGTTTAC  3916

Query  220  --------------------------------------------------  219
                                                              
Sbjct 3917  CAGAGATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGAATTCTG  3966

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