Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001738632.2
- Aligned Length:
- 3972
- Identities:
- 194
- Gaps:
- 3759
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCGGGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGCCGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAAGGTCTCGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCTCACAGGCTGGAGTGCAGTGATACGATCTTCACTCACTGCGGGTTTCCAAGTAGCTGGGAGTACGAGCAC 666
Query 1 -------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGA 25
|...||||||..||||||.|||||.
Sbjct 667 ACACCACCACACCTGGCTAATTTTTAATTATTATTATTATTATTTTGAGACACAGTCTCGCTCTGTCACCCAGG 740
Query 26 CTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTC 96
||||||||.||||| || ||||||||||||||||||||||||||| |.||| ||||||||||||||||||||
Sbjct 741 CTGGAGTGCAGTGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTC-CAAGGTTCAAGCGATTCTCCTGCCTC 811
Query 97 GGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGA 170
.||.|||.||||||||||||||||||||||||||.||||||||.|||||| |||||||||||||||||||||
Sbjct 812 AGCTTCCTGAGTAGCTGGGATTACAGGCACACGCCACCATGCCTGGCTAA---TTTTTGTATTTTTAGTAGAGA 882
Query 171 TGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------- 219
.|.|.||||||||||||||||||||||||.|.|||||||||||||||||
Sbjct 883 CGAGTTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAA 956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 957 AGTGCTAGGATTACAGGCATGAGCCACCGCGCCCAGCCAATTTTTTGTAGAGAGGGGTCTCACTATGTTGCCAA 1030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1031 GGCTGGTCTCAAACTACTGGGCTCAAGTGTTCATCTCACCTCAGCCTCCCAAAGTATTGGGATTACAGGTGTGA 1104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1105 GCCACTGCACCTGGCCCTGTATGTTTTCTTTGGAGAAATGTCTGTTCACATGGTTTGCCCATTTTTTAATTGGG 1178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1179 TCATTTGAGTTTCTTACATATTCTGGTCATTAACCCTTGTCAGATGTGTGGTTATTAACAGCCTTTTAAAAAGT 1252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1253 TTGTCTGAGAGTCCTTTGTTGGCCGCCTTCCTAACTGAAGTCTTCTGTCTACTTATATGATTGAATTCTTTTAT 1326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1327 TTAAATGATGATTTAATCAACAACTATTTATGTGGTGTCTGTGTGTAAAGTCTTGGTTTATCAAATGTGTCAAC 1400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1401 AAAACATTTTATAGGATTTGGCCTCTGCCCTTCAGGGGCTTGCAGTTTAGTTGGAAGGTAGACCAAAAAACTTC 1474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1475 TATGTCAATATGTGCTAAATGCAGAATGTGTTAGCAGAGAGTTTTGACAGGCTGGTTTTGGGCTAGGAAAGGCA 1548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1549 TGCCTTGAGCTGCAGGCAGTGGTCTTCTCTAACTCCCAAGTCACGCCACTCCCTGCTCTTGTGTGTCGGTTTAA 1622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1623 ACTGTTACTCCAATTTCCTAAATGTTTACTAAGTAAAGGGCTATGGCACACAAATAAACTAAACAAAATAGTTC 1696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1697 TAGTTAGACCCTTGGAAAAATCTTCCCCTTTTCTGGGCCTCAGTCTGTTTATCTATAAAATGCAAGGATAGAAA 1770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1771 CCAGTGATTCGAAAACATTTATTGTTTGTTTTTTGAGACAGAGTTTCGCTCTTTCGCTTAGGCTGGAGTGTAGT 1844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1845 GGCATGATCTCGGCTCACTGCAACCTCAGCCTTCCGGTTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGC 1918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1919 TGGGATTATTACAGGTGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAATAGAGACAGGGTCTCACCATG 1992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1993 TTGGTCAGGCTGGTCTCGAACTTCTGACCTCATGATCCACCCGCCTCAGCCTCCCGAAATGCTGGGATTACAGG 2066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2067 CGTGAGCCACTGTGCCTGGCCAAAACATTGTTTTTAATTAGTGGGAGCCTTTCTTTAAATAAAACTACCCAGAT 2140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2141 GCTCAATTTGTAAATGAGAGTTGCTTTTGGAGGGTTGGGGGTTGCAGGTTAGCACAGAGACAGTGGAAGGGAGC 2214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2215 TCAGTCTCTCCGGCCTTCCGCAGGCAGCGCTCGAGTACCTTCTAGGTACCTTCCCTCATGAGCAGTTTCAAAAC 2288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2289 CATTGGGCCATTGGGGTAGGATGCATGGCTGTTTTTTGTTTTGTTTTGTTTTGTTTTTGAGACGGAGTCTGGCT 2362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2363 CTGTCACCCAGGCTGGAGTCAATTGGCGCAATCTCAGCTCACTGCAACCTTTGCCTCCCAGGTTCAAGCGATTA 2436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2437 TCTTGCCGCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACTACACCTGGCTAATTTTTGTATTTTCAG 2510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2511 TAGAGACAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGGCATGGCT 2584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2585 AGTTTTTATGTAATTATGAAATACAGCACTATTTGGTTTTCTGTACTACCAAACTCTGTCAAGAATAGTTAATA 2658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2659 TATGTTGTTAAAAAAAGAATAAAAATAATTTAAAAATAATGGTTAATATATATTGGGATATTAAAAGGGAAAGA 2732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2733 CATTATTAGCTAAGCCCCAAAATGTCCGAGAGGCAAGTTACTTATTGCTGCAAGTTTTCTTTTACAGCAAGAAT 2806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2807 AATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGCTTTAAATATAT 2880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2881 GGGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAATGATGGATACATTATTCCTTCACA 2954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2955 CAGTGGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTTGCTAAATTAAGGTCTTTTATAAATTTAGTA 3028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3029 AATCAGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGAAAGAAAGAGCCACTTAAATTCTTGTTTAAA 3102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3103 AATACCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGTAGTGCTCAGACATCTGCAGTGTTGAGGCCA 3176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3177 GTCACTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTTTGAGCCTTACTCTTAAGTTCTCTATGAAGA 3250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3251 ACTACATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAATCCTCTCCAGGACAAAAATGAACATGAATGG 3324
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3325 AGTGGCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAATGACTAGGGTTCACTTTCTGGGACTGATGTT 3398
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3399 TAATTGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACCCGCATGTGCTCTAGCAA 3472
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3473 GGATACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACCAAAACAGTCCTTCAACTTTGCACTGTGCCT 3546
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3547 TAAGTAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCTACTTTCGATGAGGAAATCCCAGTAAGCTTT 3620
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3621 CTGATTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTATAGAATTACCACTGTTGGAATTTGGTACAA 3694
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3695 AATATGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGTTAGGTAGGTTCTGTCCAGTTCTTAGGGACT 3768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3769 TTTTTCACATTATAGCATTTTTACCCTAAACATGATGTTGAGATTATTATATACTGTATTTTCTTCTAAATTAA 3842
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3843 CCCTAATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCATTGTTTTGTTAGATGCAGTAATGATGTTTAC 3916
Query 220 -------------------------------------------------- 219
Sbjct 3917 CAGAGATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGAATTCTG 3966
