Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001740287.1
- Aligned Length:
- 2364
- Identities:
- 188
- Gaps:
- 2151
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGAAAGGTAAGGGCCCTGGGCGAGGAAAGCGCGGCCCTTTCCGAGTTTGGTGTTTTGCAGCGAAAGGAAATCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTCTTCCGAAAGTCCTCCAGGGCGAGAGAGGAAAGGGCCTAGGTACTGTGCTGGGGTCGCACAGCCGGCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGTGCCGGGACGGGGAGCCAGGCTTCCGAGTGCGCCCGGTCACTGACTCCTCCGCGCTTTCCTCGTGCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCAGCCCTTGGTTCTTGGAAACGCCGGCGCCTTGTTCAGGGCTGGTGGGGCTGGGGCGCAAGGTGCAGCTGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATGCCCGAGAGGAGCCGCAGCCTCTGGTGGAGTTCGGTCGGGTGTGGGGGTAGTCAAGGAAAGAAGCAAAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATACCTCCTCTGAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAAACATGCCTATCATCACATCAAAGAGGGGCCATTCTAAGTATATGTGCTGCCGCATCGAGCACTGTTCAGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCTTAACCAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGGCTCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCTGTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTCCTGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAGGGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTGAGTAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAACAATTCAA 1850
Query 1 ------------------------------------ATGG--AGTCTCATTCTGTCGCCCAGACTGGAGTGAAG 36
|.|| ||||||..|||||||.||||.|||||||..|.
Sbjct 1851 CCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAGTCTCGCTCTGTCGTCCAGGCTGGAGTCCAA 1924
Query 37 TG--GCATGATCTCGGCTCACTGCAACCTCTGCCT-CTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAG 107
|| || |||||.||.|||||||||||||||||| || |.|.|.|||||||||||.||||||.||||||.|||
Sbjct 1925 TGCTGC--GATCTTGGATCACTGCAACCTCTGCCTGCT-GGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAG 1995
Query 108 TAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCAC 181
|||||||||||||||||||.|.|.||||..|.||||||| |||||||||||||||||||||.||||||||||
Sbjct 1996 TAGCTGGGATTACAGGCACGCACCACCACACACGGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCAC 2066
Query 182 CATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------ 219
.|||||||||||||||||||.|||||||||||||||||
Sbjct 2067 TATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGAGAG 2140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2141 TACAGGCGTGAGCCACTGCATCCAGCTCTTAGCATGTGCTTTTAAAGTAAAAACCACGAGGAGAAGGTACTCAT 2214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2215 TACTTCATAACTTGTGTCTCACCCACCTTGCTGTCTTCACATCCCCACTTTCTGTATGCACATTGGAAGGTGAA 2288
Query 220 ---------------------------------------------------------------------- 219
Sbjct 2289 TTTGTTCAGCTCACATTAATTTATAGGAATAATTTTCATTGCTCTGTGAATAAAATGTGCTACCACTTTA 2358
