Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001740293.1
- Aligned Length:
- 2327
- Identities:
- 188
- Gaps:
- 2114
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGAAAGGTAAGGGCCCTGGGCGAGGAAAGCGCGGCCCTTTCCGAGTTTGGTGTTTTGCAGCGAAAGGAAATCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTCTTCCGAAAGTCCTCCAGGGCGAGAGAGGAAAGGGCCTAGGTACTGTGCTGGGGTCGCACAGCCGGCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGTGCCGGGACGGGGAGCCAGGCTTCCGAGTGCGCCCGGTCACTGACTCCTCCGCGCTTTCCTCGTGCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCAGCCCTTGGTTCTTGGAAACGCCGGCGCCTTGTTCAGGGCTGGTGGGGCTGGGGCGCAAGGTGCAGCTGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATGCCCGAGAGGAGCCGCAGCCTCTGGTGGAGTTCGGTCGGGTGTGGGGGTAGTCAAGGAAAGAAGCAAAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATACCTCCTCTGAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAAACATGCCTATCATCACATCAAAGAGGGGCCATTCTAAGTATATGTGCTGCCGCATCGAGCACTGTTCAGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCTTAACCAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGGCTCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCTGTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTCCTGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAGGGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTGAGTAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTTATTCTGTCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCAC 1776
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1777 GAGAGAGGAGTGACCAAGACGATCTTTAACAATTCAACCTCAAATTTCTAATTTCACCAACAACTATTTATTGA 1850
Query 2 TGG--AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTG--GCATGATCTCGGCTCACTGCAACCTCTGCCT-C 70
.|| ||||||..|||||||.||||.|||||||..|.|| || |||||.||.|||||||||||||||||| |
Sbjct 1851 GGGCTAGTCTCGCTCTGTCGTCCAGGCTGGAGTCCAATGCTGC--GATCTTGGATCACTGCAACCTCTGCCTGC 1922
Query 71 TCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCT 144
| |.|.|.|||||||||||.||||||.||||||.||||||||||||||||||||||.|.|.||||..|.|||||
Sbjct 1923 T-GGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCACCACACACGGCT 1995
Query 145 AATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAA 218
|| |||||||||||||||||||||.||||||||||.|||||||||||||||||||.||||||||||||||||
Sbjct 1996 AA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAA 2066
Query 219 G------------------------------------------------------------------------- 219
|
Sbjct 2067 GTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGAGAGTACAGGCGTGAGCCACTGCATCCAGCTCTTAGCATGT 2140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2141 GCTTTTAAAGTAAAAACCACGAGGAGAAGGTACTCATTACTTCATAACTTGTGTCTCACCCACCTTGCTGTCTT 2214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2215 CACATCCCCACTTTCTGTATGCACATTGGAAGGTGAATTTGTTCAGCTCACATTAATTTATAGGAATAATTTTC 2288
Query 220 --------------------------------- 219
Sbjct 2289 ATTGCTCTGTGAATAAAATGTGCTACCACTTTA 2321
