Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001740298.2
- Aligned Length:
- 2168
- Identities:
- 188
- Gaps:
- 1955
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGGTGTCCGCCCCACGGCCGGCGTTGCCGGGGTAACGGCGAGCGCGTGGGGCCAAGAAAGAATACCTCCTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTATTTGCAACTCAGCCTAGAAGAGTGCTATATCGGAAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGAGAGGAGTGACCAAGACGATCTTTAACAATTCAACCTCAAATTTCTAATTTCACCAACAACTATTTATTGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGCTAGTTTCTCATCCCAGTTTCCCCAGCCTCCTGTGAAGGTGTCAGAGAAAGAAGATAGCCCTCTCTTCATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCTTTCTGAACTCTGCCTTTTCAGTGGGCAGAGGAAGTGCTTTGTAGCAGCAAACCCAACCCCTGAGCCTCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTGTCGGGTCAGGCAAAATGAAATTGACACAGGCTGGAATTTTACTGATTTCAGTCATTGCTGGGCTCGTTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCAAATAGACTCAGAAGAGCTCCTTTAAAAGGAGTGACCATTTCCTGATTTAGATTCTGAGGGGGTTTTTGGT 1628
Query 1 ----------------------------------------------------------------ATGGAGTCTC 10
|||.||||||
Sbjct 1629 TTTTTTTACTGTTGTTCACTATCATGAGCTTACCATGTGCTTTTTTCTTTTTTTTTTTCTTGTGATGTAGTCTC 1702
Query 11 ATTCTGTCGCCCAGACTGGAGTGAAGTG--GCATGATCTCGGCTCACTGCAACCTCTGCCT-CTCGAGGTCAAG 81
..|||||||.||||.|||||||..|.|| || |||||.||.|||||||||||||||||| || |.|.|.|||
Sbjct 1703 GCTCTGTCGTCCAGGCTGGAGTCCAATGCTGC--GATCTTGGATCACTGCAACCTCTGCCTGCT-GGGTTTAAG 1773
Query 82 CGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTG 155
||||||||.||||||.||||||.||||||||||||||||||||||.|.|.||||..|.||||||| ||||||
Sbjct 1774 CGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCACCACACACGGCTAA---TTTTTG 1844
Query 156 TATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------- 219
|||||||||||||||.||||||||||.|||||||||||||||||||.|||||||||||||||||
Sbjct 1845 TATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCC 1918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1919 GCCTTGGCCTCCCAAAGTGCTGAGAGTACAGGCGTGAGCCACTGCATCCAGCTCTTAGCATGTGCTTTTAAAGT 1992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1993 AAAAACCACGAGGAGAAGGTACTCATTACTTCATAACTTGTGTCTCACCCACCTTGCTGTCTTCACATCCCCAC 2066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2067 TTTCTGTATGCACATTGGAAGGTGAATTTGTTCAGCTCACATTAATTTATAGGAATAATTTTCATTGCTCTGTG 2140
Query 220 ---------------------- 219
Sbjct 2141 AATAAAATGTGCTACCACTTTA 2162
