Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001740301.2
- Aligned Length:
- 2127
- Identities:
- 188
- Gaps:
- 1914
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGGTGTCCGCCCCACGGCCGGCGTTGCCGGGGTAACGGCGAGCGCGTGGGGCCAAGAAAGAATACCTCCTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTATTTGCAACTCAGCCTAGAAGAGTGCACACAGAAATGTCTTTTCTGCCTTTGAAGCTAGGACCGCTTCTTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCTCCCCTCTTCTCCAGGAGCTCTGTGATGGCTTTCTTTGATAGTTCCTGCAGTGTCCAGTGTGGTTCTTGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATACAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGAGCCTTTAACGATAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCTACCATTACTTTCGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGGAAAGGCCCTCCATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCTCCGCAGGCCTCTCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGCTGTGCTATTTGATTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAAGTTCAGGAGGTGATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAACAATTCAACCTCAAATTTCTAAT 1628
Query 1 ---------------------ATGG--AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTG--GCATGATCTCG 49
|.|| ||||||..|||||||.||||.|||||||..|.|| || |||||.|
Sbjct 1629 TTCACCAACAACTATTTATTGAGGGCTAGTCTCGCTCTGTCGTCCAGGCTGGAGTCCAATGCTGC--GATCTTG 1700
Query 50 GCTCACTGCAACCTCTGCCT-CTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAG 122
|.|||||||||||||||||| || |.|.|.|||||||||||.||||||.||||||.||||||||||||||||||
Sbjct 1701 GATCACTGCAACCTCTGCCTGCT-GGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAG 1773
Query 123 GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCT 196
||||.|.|.||||..|.||||||| |||||||||||||||||||||.||||||||||.||||||||||||||
Sbjct 1774 GCACGCACCACCACACACGGCTAA---TTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGCT 1844
Query 197 GGTCTCGAACTCCTGACCTCAAG--------------------------------------------------- 219
|||||.|||||||||||||||||
Sbjct 1845 GGTCTGGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGAGAGTACAGGCGTGAGCCA 1918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1919 CTGCATCCAGCTCTTAGCATGTGCTTTTAAAGTAAAAACCACGAGGAGAAGGTACTCATTACTTCATAACTTGT 1992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1993 GTCTCACCCACCTTGCTGTCTTCACATCCCCACTTTCTGTATGCACATTGGAAGGTGAATTTGTTCAGCTCACA 2066
Query 220 ------------------------------------------------------- 219
Sbjct 2067 TTAATTTATAGGAATAATTTTCATTGCTCTGTGAATAAAATGTGCTACCACTTTA 2121
