Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001745359.2
- Aligned Length:
- 2710
- Identities:
- 193
- Gaps:
- 2494
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAAAGTGCTAGGATTACAGGCATGAGCCACTGTACCCAGCCGGCAGATTTTTTTTTTTTTTTAAGGATAATCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTTAGAGAGAGAAGGTCACATTGCATACTGCTTATTGACATCTCTGGAAGAGAAAAGTTTGCTTCCAATTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGTTGAAGATTTTGTGTTTTGAGTAACTCCCCGGGAGACGCTGATGCTACCAGTCTGAAGACCACACTTTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACCACTGCTCTAACACTTTCTCCAAGCGTGAGTAAAGCAGCCCTGATTCTCTTGACTCTACTTAACCAACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCTATCCTATCATGGCTATAACCATGGAGGCACGTTCACAGGCAGAAAAGTAAAGGTTATTTGAAAGGTCAGA 370
Query 1 ----------------------------------------------ATGGAGTCTCATTC-TGTCGCCCAGACT 27
||||.||.|...|| ||||.|||||.||
Sbjct 371 GAATACAATGAGGTGATCCTTTCTTTTCTTTCTTTTTTTTGGGGGGATGGTGTTTTGCTCTTGTCTCCCAGGCT 444
Query 28 GGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTC-GAGGTCAAGCGATTCTCCTGCCTCGG 98
||.|||.|.||| || |||||||||||||||||||||..|||||| |||.|||||.|||||||.||||||.|
Sbjct 445 GGGGTGCAATGG--TGCCATCTCGGCTCACTGCAACCTCCACCTCTCAGAGTTCAAGTGATTCTCTTGCCTCAG 516
Query 99 CCTCCGGAGTAGCTGGGATTACAG--GCACACGCAACCATGCCCGGC-TAATTTTTTTTGTA-TTTTTAGTAGA 168
|||||.|||||||||.|||||||| |||||| ||||||||||.||| ||.||||||||||| |||||||||||
Sbjct 517 CCTCCTGAGTAGCTGCGATTACAGGAGCACAC-CAACCATGCCTGGCTTATTTTTTTTTGTACTTTTTAGTAGA 589
Query 169 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------- 219
|||||||||||.|||||||||.|||||||||||||||||||||||||||.|
Sbjct 590 GATGGGGTTTCGCCATGTTGGGCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCATCCACCTTGGCCTCCC 663
Query 220 -------------------------------------------------------------------------- 219
Sbjct 664 AAAGTGCTGGGATTACAGGCATGAGGCACCACGCCCAGCTGAGGTGATCTTTCTTTACACCCAAAACAGGGTCT 737
Query 220 -------------------------------------------------------------------------- 219
Sbjct 738 AAAGAAAACTGGGTCTAATTCTGCTTTCCGTAACTTAAGGCTCTTAAGAAGAGACAGGTAATATATTAAGAAAA 811
Query 220 -------------------------------------------------------------------------- 219
Sbjct 812 ACAGGACTCATGGGGAGGACAGAAGATCTATTTATCCTAAAGAGGATCAAGGCCAAGAGAAACCAATTAATTCC 885
Query 220 -------------------------------------------------------------------------- 219
Sbjct 886 TTTTCAAGTACATAAAGTAATACTACAAAGGATGTATCTGTGTCTCTACTTCCTAAGGTCTGTCATCATTTCTA 959
Query 220 -------------------------------------------------------------------------- 219
Sbjct 960 AAATAGGGATAATCATATCTACTTTGCCTATTTAAAATGTATGCTGAGATAATAAGATGTGAGAGGGTTTTGAA 1033
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1034 AACTACATATTGATATGCAAGTCTAAAATATTAATATTTCTATTCTTTCAAATTAAGTGTTCTTAACCTATATT 1107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1108 CCATGGATGTCTAGAACCCCCTACAACAGTATGCAAAATTTTGTGTTTTTAATATCCTGGGGAGAGAGCCCATA 1181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1182 GTTTTCATCAGTTTTTCAAATGGCTTTCTGTTTTAAGCACCAATCCTGACCTAGAGTGATAGTCAAGCTACCTC 1255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1256 TACCACCATTTATCAGACACTTTGGAGATTTTTGTCTCTACTTCCAAGTAGATATGGTTCAGATATTCCTCAAA 1329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1330 ACACCTCTCTCTTCCAAGCCAAATGAGCGGCTTGAACTAACTCTTTACCTATGAAAAGGATTACTTCTTGCCAA 1403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1404 AAGAATATCGGGCATCAAGCTGGCTGGATACTCATGAAAGTCAATCAACCAGATTTCCTATGGAAAAGTACAGA 1477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1478 GAGCTGGAGTGGGAGGAGGAGGAAATATTAAAATGTTGAAACACAGAAAAAGTTATTGCTGATCTCCATGCATG 1551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1552 TCAGTCGAGGTTACTACCAGAAGGGACTAAAGATCTCTCAGGGGAAGTAAAACACATTAATAAAGACAGTCTTT 1625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1626 AAAAGGAAGTGTTCCCCAACCTTTCAGCAGTAAAGCTGTCTGAACAGGGCTAAGAAAATCCTTCACATGAAAAC 1699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1700 AGCTGAGGAGCAGAGGCTCCAGGAGAAGTTTTCCAGTGATTGATGGAACGTAACCTTGAAAGTCTACCTCGTCA 1773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1774 GTTCTTGAGATTGGGGTTCTTCAGGCTTCATCCCGGCTTATTTCCCTGCTGGAAATCAGAGATAGAAACAAATG 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 AAGCATCAGGTTGAAAACAGAAGTGCAAAACAGTCACAGGAAACACAACCCATACATCACACCAGCAGCCGGAG 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 GAAAGCCCCTGCCCACCAGAGATGACCAGGCAACAAGCCCTGGCCAGGCAACTCTCACACCTTTCCCAGCTTCG 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 TGGATAATTAAGAAACAGTGGTGACCTAGTACCTAGGAACTAATCAGAACGTAGAGTAATAACTGTTTTTCCAA 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 CCACGGATCTTGGTAGGAGCTTCTCAGAGGTGATCCTTGTCACCCGTCAGAAATGGTTGCCTCTCATTATCAAG 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 AAACAGAAGGAGAAACAAAACGACCAGTGAACTCACCATCCACTCAGGCATGTGAAAAGCTGAGGTGCCCTCAT 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 TACCGTCCCACTTCTCCATAGTGCAGGCTTGGGTAAGATATGTCCTGAAGCAAAAGGGAAAGCTGGTTTGGAAA 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 TACTGGGGTTATCTGAGTGCCCCAAAGCAGACCCAACCCTAGTGAGATTCAGAAGTTCACAGTGGCTAGCAGAA 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 GCTGCATCCCTTTTCACAGCAGCCTCCGATTCAAATCAAGAGCATTAGTCAACTGCCTGACAACCCCTTACTGG 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 CCGGCTTCAAAGCCTTCTGTGTCTGATTTCAAAATCAGAGCTGATGCAAAGTGCTGCACCCAGGCACTGTGCTT 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 CTCACAGGGCACTCACTGTTTTAATGCTACCCAAACACTCTACCCGCACCTCCCCAGTGGGGACTTTCTGCAGC 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 AATAGTTGGACTTCCTTCTTTCCCTGTGTGTGAGGCACTTGTGAATTCTCTCCCACCCTTCAGGACACGTCACT 2661
Query 220 ---------------------------------------------- 219
Sbjct 2662 GGAGGTGCGGATACCAAGATCAATAAAGACTGAGGTCAGGAAGGCA 2707
