Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001749803.1
- Aligned Length:
- 2655
- Identities:
- 193
- Gaps:
- 2439
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCAGGAGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACGACACCCGGCCTAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCTTCTTTAAAGACAAATTTCCAGTGGGGCTCTGTAAGTAATCCTCATATTTTCTCGTTGAGGAGTGTGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAGAAGGTGAGTCTTCTGCACGTAGCAGGGGGGAAATGGTCAGGAGATACTGTAAAAGCACTAAGAAAACCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGAAAAGGCCAGGCTCCAGGAGCACAGAGACTGGATGGATTCCTGCTTCCCTGTCACTCGGCTCTGTTCAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGTGCAGTCACTTCCTTCACCTCAGTGTCCCTGTTTGTGCAAATGAGGTGACTATTGGTGCCGACCTACTTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGCAGTTTTGAAGAGAAGTGGCAAACGTTGAAGGGCGCACACTCTCCTTCCCCAAGCTCCCTCCCTCCCCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGTGCACCCAGAAGGAAATAAAAGCCGTAATTTGCACTGGCGAGTCGGCCCGCCTCGTCGAGGGTTCCGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGCTCACAAGGGCGTGCGGAGGCCCGCGGCCGGCCCTGGCCCCTGTGGTGGCAGCAGCTGGCTGGCTTCCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCGGCTACCTCCAGCTGCAGCTGTCGGTGCTATTTGCAGCTCTCCACATCCTGAGAGCTGGACGCCGAGGACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTCCCTGGAGGGCGTGCGTAAAATGCAGCAGCGGAGCGGTGAGGAGATTACCGGAAAAACTGGGAGCGGAGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCTCGTTCTGGAGCAGGGAGAGGCTTGGGAAGTTGCGAAACGTTGACCTGCAGGGTCTTGAGGAACTGTCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTGGGCTGTCCCCGTGGGTCATTGAACATTAATCAGCCACCAGTCCTCGACCAAGCCAACCGAAATAGAGTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGGCAGAATGACGAATACAGTTTGAAAGGGAACGAACTTACTCTTATTCTCTCCTTGGAAAGGCCTTTCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTCTCGAACTCACCCCTGTCACATTACCCTGTTGTGTTATCTTTGTGGGCCTGCGCAGCACCTGAAATGATCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCTTAGAGATGGGGTCTCACTGTGTTGCCGAGGATGGAGTACAGTGGCTATTCACAGGCACAGTCATTGTGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTACATCCTGGAACTCCTGGGCTTAAGCAATCCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTATAGACACAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCACCACACTCAGCAAAAGTGACAATTGTTTCTAATACAGACATCCACACCTGGACATACTGTGAAAATTATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCATTGGGCATATTAGTGTCCGTTCTTTCCAAGATCTGAGTTCATAATGTTTTCTTCTGTAATTGTAATGAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATCACCATTTCTTGCTAGCATTATACCAAATCCCTCTAGGCAACTGGGTAGCAGGCTATATGCCAACCTAGGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTGGAGATGACTTGTATCTTGTTTGCTATTAGAGCCAACATGTTAGAATTTGTGATTTGTCACAGAGTAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACGAGTTCACTCAAGAAGCACTTATTTATGAGCACCTACACAGGTGATAGAACAGTCAAAAGACAGGAGTTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCCCTTCTGGAACTGACAATCTTACTAGAAAAATAAATGTTACCACATCACTTGAACAAAGGCACAATTATGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATTTGAGTTGTGTTTTGACTTCCTTCCCACTACCTTGTTTTTTTGTTTTTGTTTTTTGTTTGTTTTGTTTTGT 1702
Query 1 -------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC 48
|||||||.|...|| ||||.|||||.||||||||...|||||.||||||
Sbjct 1703 TTTTATGCTGGAGGTGTTGTGGGAGATGGAGTTTTGCTCTTGTCACCCAGGCTGGAGTGTGATGGCACGATCTC 1776
Query 49 GGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACA 121
.||||||||||||||||||||| |.||| |||||.||||||||||||.|.||||||.|||||||||||||||||
Sbjct 1777 AGCTCACTGCAACCTCTGCCTC-CCAGGTTCAAGTGATTCTCCTGCCCCAGCCTCCTGAGTAGCTGGGATTACA 1849
Query 122 GGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGC 195
||||.||||.||||.|||||||||| |||||||||||||.|||||||||||||||||||||||||.|.|||||
Sbjct 1850 GGCATACGCCACCACGCCCGGCTAA--TTTTTTGTATTTTCAGTAGAGATGGGGTTTCACCATGTTAGTCAGGC 1921
Query 196 TGGTCTCGAACTCCTGACCTCAAG-------------------------------------------------- 219
||||||||||||||||||||||.|
Sbjct 1922 TGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGTGTGAGCC 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 ACTGCACCCGGCCCCTCCTTGCTGTCTTAATAGAAAGTGGAAAATAGAAATCTTCTGCACAAGGCCTTTGGTTT 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 GAATGCAACATGCCTAGAGATAGGGAACTGGAATCCAACACCGTTGCCTACAGATCTTTGGAGACTAAAAGAGA 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 AAAAATCCAGGAAAGAAAAAAAAAAAAACAAAAAACGGCTGCCATAGCTATTGGCCTCATTGGACAGGCCTGGG 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 TGATGTGCACAGACCCTAAAGGTGGCCGGAGCTGACCAGCTTCCTATTGCACTCTTCTGGGTGGCCCAGGCACC 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 CAGTTGCATTGGCTGTGGCCACTGAGAAAGGATTGAGTCAGGCTGAGCCATGGGCAATGACAGAGGAGAGGGGA 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 TCAGCAGAGCCTACCTGAAAGCAAAGGAGAAATGGGTCGGTCACCTCATCGCAGAATTTACAGATGAAGGGGAC 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 AAACTTGTTACCTGAGGGTTTCCTTCATGCCTTGGAGTTTCTCTGAAAGAAAAGACAGCTGAGCATTTGCCCTG 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 TTTTTGTTTTACCATTTTTACACTTTCGAAGTCATGCCATCAAGTTTTAAGCTAGTAAGAGGACCATATACCGA 2587
Query 220 ----------------------------------------------------------------- 219
Sbjct 2588 ATGGTACAATATCATAGTTCTTGTAGCAGCTACATTTTGATGAATAAAATTTCTTTTAAAATCTC 2652
