Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001752587.1
- Aligned Length:
- 4770
- Identities:
- 190
- Gaps:
- 4554
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCTAGTGACTAGGCTACTTTTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATTTGAAATCAAGTTTGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGAAGTGAGTCAAGATCACAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCAGAGGAAGCAAAGGGAGCCAACGCCCAGGACAGCTCCCCTGCCCACCCCGCCCTTGACCTCACCTTTTCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAGGGACTCCACAGCATGGCGGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATGATGTCCCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTGGCTCCAGGCCTCATACTCCTCCTGGCTCAAGTACTCTACAGGTGACATTGGACGGGGCCATCATAGACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCTGTGTGGGGGTCTGGGGGAGTCCCATGGTAAACACCCCTGTCCCCGTGAACCCTGCCAGCACTGGGAGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTCTTCTTAGGATGTCCACTTTACAAACCTGACCCTGCACACCCCGCTCTGTGCCCTGCACCTCCATCCTGAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATCTGGACACAGCAGTGCCTCCTGCCACCCTGCCAGCACCGAGCCCCTCTTCCAGCCCACCCCAGTGGGGTCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGCCCCTCCCTGGAGCCTCACCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCTGCTGAGCCCTGCAGAGACCAGCAGAGGCCCTGACCCAGCTGCCTCCTGCCAGGCTGGAGCGCTCCATCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCGGCCATGCCAGTCTCCAGAGCTTTCAAAAGACTCCAGGGCCTCGGCCCACCCCTGGAGATGCTGATTTACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTCCTGGGGCGGGACCCAGGGGGTGCTGTTGAGCAGCCAGCGTACAGGGCCCCACTCCAGGACCTCAATATTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGGTGGGTCCCTGGCCTGCAGCCTGGAGTCACCGAGAGAGCTGTTAGAAATGCAGAGTGCCAGGCCTCTCCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGACCTGCTGGCTCCGATCCCCAGGGGACTTGAGTTTGCAATGAGTGATGGGGGTGCTGAGCTCAACACTCCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTTCTAGCACTGTGCGTTCCGTGCACTTGAAACTTGGAGCCTCCCATAGGCTGATCTAGAACAATGGTTTCCT 2146
Query 1 ----------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCT 52
|..||||||||.||||||||||||.||||||||.|.||||...|||.|||||
Sbjct 2147 TTTCTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCTCAATCCCGGCT 2220
Query 53 CACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCA 125
|||||||||||||||||| ||.|| |||||.||||||||||||||.||||||.|||||||||||||||||||||
Sbjct 2221 CACTGCAACCTCTGCCTC-CGGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCA 2293
Query 126 CACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGT 199
|..||.||||.||||.||||| .|||||||||||||||.||||||..|||||||||||.|||..||||||||||
Sbjct 2294 CCTGCCACCACGCCCAGCTAA-GTTTTTTGTATTTTTAATAGAGACAGGGTTTCACCAGGTTACCCAGGCTGGT 2366
Query 200 CTCGAACTCCTGACCTCAAG------------------------------------------------------ 219
||||||||||||||||| ||
Sbjct 2367 CTCGAACTCCTGACCTC-AGATGATCCACCCGCCTCGGCCTCCCAAAGTGTTTGGATTACAGGTGTGAGCCACC 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 ATGCTCGGCCTAGAGCAGTGGTTTTCAATGGAGCAAGGCAGGGGGCAATGTCACTCCCCAGGGAGGGTGACCAG 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 CTGTCCCTGCTTGCCCAGGACCGAGGGGCTTCCCTGCAAGTGGGGCTTTCAGTGCTAAGACCAAGACAGTCCTA 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 GGAGAACCAGGGGACCCTTGGCAACCTATAGAGACATTTCTGGTTGTCACAGCTGGGGCATGGGAGTAGTCCCG 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 GCATCCTGGGTAGGGCGGCCAGGGATGCTGCTCTATATCCTGCAGTGCCCAGGACGGCCCCACCACAGACGGGG 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 ATCCAGCCCCAAACGTCCATGGTACCAAAGCTAAGAAACCCAGAGCTAAGAAACCCAGATCTAGAATGTTCTAG 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 AATGAACATTTCATTTGCAATATATAAAGCATCCATCACAAAGAAACAACATCTTCAGCAGTGATCTTGGCAGG 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 CTTCCCTCCTTAGGGGGGTCTCACCACGCCCACCCTCTATTGCTGGGCAGGAGGAGGAAGCCGAGGCAGGCTGG 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 GTGCCATTTCCCTGTGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGAT 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 GGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGA 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 ACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGCC 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 AGGTTGACCCGGATGTAGAATGAGTCCCCCGAGGTCGCCACTTTGGCCTCCAGGTCCTGGAGTAGCCTCTTATA 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 ACCTGATAAAAGGGGACATGAGCCACAGATGAGCCACAGATACGAGCCTCTGCGAGGAAGGTTGCAGAAAATTA 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 AAGTAGGAGAGAAGGAAGGACCCTCCCAGTCTCAGAAGCTGCTCTGGCACTGGAGTCAGTGGGTGGGAGGTTTC 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 CAGCTGGCTTGGGGGCCTCCTGGGGACCTGGGGCACAGCCTGGCTGATCCTCTCTTGGCTCTGGGGGTCCCTGG 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 CTGCTGGGCGTGCAGAAGAACCACCAGGGACTTAAGGGTCATGGAGTCTGGCCAGGCAGCTGTGCACACGAGAG 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 GAGTGGTATGTGTACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCC 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 ACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGGGCTCTGAGGCTTCGTAATCAACCTGAGG 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 GCAAGTCGAGAAGGTCAGTCTCTTTCCCCCGGGACTCTGAATCCAGCCAGAAGACAGAAGGCGCTGAGGGCACT 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 GAGGCGAGGCGCGGGCCAGCCCTGCCGTAGGACCACTGCCTGCACGCCTTGGTCAAAACAAAGCCACACACCAG 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 AGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTGCCAACC 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 CTTCCCCAGTCGAGATCGGGGGTTCTTTGTGATAAGCACTTTCCTGTCTTGAAAAAGAAAAGAAAAGAAAAGAA 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 AGAACCTCGGTTCTAGAACATTCAAGAGCATTCTAGATAGAGGTTTCTTAGCCTTGGGATCATTCTGTGCTGCT 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 GCGGGCTATACCGGGCCCTACAGGATGCTGAGTGGCATCCCTGGCCTTCACCTACCCGATGCCCTGGCTCTCCA 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 CCCACAGCCTTCCCCACTGTGAAGGCCCACCCCCCAGGGCTTCCACCATCCACTTCATTTCTTCTCAATATTGT 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 TCTAAGCTTAGGAGAGTAGATATTTTTACAATAAAAATTAAGATGTGTTTTAACACCATTAGAATCTAATTGGC 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 CCCCTTAGGATATCGGGACTATCTCCCTGAACATCGTCAAGGGGCTCTGTTGCTTGAACTACCTCAGAGCTGAT 4363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4364 AATTGGGAACCTTAAGAGCAGGGTTCCCCAACCCCTGGGCCACATACTGGTACTGGTCCATGGTCCATCAGGAC 4437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4438 CCGGGTCACACAGCAGGAGGGGCGTGGTGGGCAAGTGAGCATTACGGCCTCAGCTCCACCTCCTGTCAGCTCAG 4511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4512 CACAGCAGTAGATTCTCAGAGGAGCATGAGCCCTATCGTGAACTGTGCAAGTGAGGGATCTAGGTTTCACGCTC 4585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4586 CTTATGAGAATCTAATTCCTGATGATCTGTTACCGTCTCCCATCACCCCCAGATGGGACCGTCTAGTTGCAGGA 4659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4660 AAACAAGCTCAGGGCTCCCACTGATTCTGAATTATGGTTCAGTGTATGATTCTTTCATTACATATTACAGTGTA 4733
Query 220 ---------------------------------- 219
Sbjct 4734 ATAATAATAGAAATAAAGTGTACAATCAATGTAA 4767
