Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001752918.2
- Aligned Length:
- 4383
- Identities:
- 187
- Gaps:
- 4173
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT 74
Query 1 ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC 26
||.||||||.|.|||||.||||||||
Sbjct 75 ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC 148
Query 27 TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCC 100
|.|||||.|||||||.|||||.||||||||||||||||..||||..|.|.||||||.||||||.||||||.|||
Sbjct 149 TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC 222
Query 101 TCCGGAGTAGCTGGGATTACAG------GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGA 168
|||..||||||||||||||||| || ||| ||..||| |||||||||||| |||||||||||||
Sbjct 223 TCCCAAGTAGCTGGGATTACAGATGTGTGC-CAC-CACACAT----GGCTAATTTTTT---TATTTTTAGTAGA 287
Query 169 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------- 219
|||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 288 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCC 361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 362 AAAGTGGTGCTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAA 435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 436 AATTTTTCTTATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTT 509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 510 ACTGATCATAATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAAC 583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 584 ATAGTTAAGATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAA 657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 658 CCCCATAGACATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAG 731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 732 CTTCTGAGACTTCCTGTTATAAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACT 805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 806 TCCTTAGGACAGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATAC 879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 880 TGACAAGCTGCTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAA 953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 954 TGCTGCCTTTGAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGA 1027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1028 GGACCCATCACAAACCGTCTTGCACAGTGTAAACCCTGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCG 1101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1102 CCCATTCTACCTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATA 1175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1176 TTTCTGAATTCCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGG 1249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1250 ATAAAAGGGGACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTT 1323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1324 TTCTTAGAATAGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACC 1397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1398 TAATTCAGCACCAAGATCCAAGCAGCTTGGAAGATACAGGAGGGAAAATTCTGGTGTAGATTAAGTGCCACCCC 1471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1472 CCAGCAATGGCCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATG 1545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1546 AGGGCAGTGTCCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTC 1619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1620 CTGGTTGTCACCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGG 1693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1694 GTGTACGCATGTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGG 1767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1768 CATGGCATCACAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTT 1841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1842 GCCTTCAAAGAGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGC 1915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1916 TCTCCAATATCTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAA 1989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1990 GAGCCTCCAGAGTGACAGGTGACTTAAAGCGCACGTGGCTCTACATTTACAATTGAAGTGGGCTTTGGAGATTG 2063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2064 CAGATTCTGAATACCTGCTGGGGTGGTACAGAGGCTGTGTTCTGGTTTTGCCATCTTGGACAGGGGGTTGGGAG 2137
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2138 TCTGGGGGGCTGCCTTCTCTCCTCTTCGTGCAGCTCTGCTGGGGCCTGTCTCACACTTGTGAGCAGAGTTATGG 2211
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2212 CTGGATTCCAGGGGAGACAGAGCTTGGTTGTGAAATGTAAGGTTGTGAAATGAAGGGCTTGTGAAATGAACAAA 2285
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2286 GAATGTATTTAAGGGTCTTTCATTTTAAATCGAACACTTACATAGCACTTACTACTTGCAAAGCTCCACTCTAA 2359
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2360 GCACTTTACCCATCTTAATTCATTTAATTCTCTTCTCAACCCTAAAAAGCAGGTATTACCATTGCTCCAATCTT 2433
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2434 ACAGATGAGGAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGAGCT 2507
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2508 GCGCTTTGAACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGCAGG 2581
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2582 ACATATGTTCTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCCTGG 2655
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2656 TCTGACTTCCCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCAGTG 2729
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2730 AAAACCCTGAGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGGGATGCTGTCCTGATCCAGG 2803
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2804 CTGGTGAGGCAAGGAGGGGCTGCGGCTTCCTGAGCTCTCCGAGCTGCTAATGTGCGTGGGGAATGCTAAGCAGC 2877
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2878 CTCCAGGCTCTGACCAGGTTTGTCTTCTAGGACCCACTTGCCCAATGGGTGCCAGGACACCAGGTCTGGGTCTG 2951
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2952 GAGAAGAGAATTCTTCTCCAAGGGATGTTGATGGTCCATTCCGGAAATGAAAGCTTCCCACGGTCTGCCCTGCA 3025
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3026 CCAGGCTTTCATCAGTGAGAAATACCCCGAATTTACACCCAAACCTAAAAGGAGAAGCGTAGAAGTGTTCTTGG 3099
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3100 CCCAATTCTTTTAATTGCAAGTCCTACTAGCAGGACAACTAAGGGATTATCCCTAAACTTTCATTTAAAAGTCT 3173
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3174 GGGGAGGGAAGGAAGGAGTAAAAACTTTGGCAGTCAGATTTTTCTCACTTTCACATTTATTCTTTACTATTAAT 3247
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3248 GACTTGTTCATCATGCTGTACAACAATTGTGCAAAGATGCATACGTTTGCCACTATAATTTGCCATTAAAATGT 3321
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3322 AATAATCAGTAAGTATACACGGCGTGCCAGGTGCTAAACAGCAGATGAGGGGCGAGGTGGGTGAAGGTTCCATG 3395
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3396 CCGTGAGTTTGTGGCTAATGGAACCCCTCATGCTGCTGCTATCCTTCCTGGGCCCAGCAGTTGGATCCTGCAGG 3469
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3470 GGTGCCCCACTCTCTCGGGGACCTCAGAAATGTCCTCTATGGTTAGGGACGGCTAAGGAGGGTGTATCTGCAGG 3543
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3544 ATTCCCAGGCACTGGGAGGTGTATAGAGGTCACAGGACCCATACAACCACCCCAGACCTTGTCAGAGTGCTCCA 3617
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3618 GTCTGGCATCCGCAGAAGGCCAGGGAGGGTCAAGGGGCAGTGCTGAGCCACTGAACACAGCCACAGAGTTGGAG 3691
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3692 CTGCCAGGCAGAAGGTGCACGGCTCAGCAGAGGAGACCCCTTGAGGCAGCAATGCTGGGGCCGGAGGGTCAAGG 3765
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3766 CTGAGGAGAAGGCCACCGCAATGCCCTGTGTGGCCCTCATGAGCTGAGGGACCATGGGAAGGTGGCCTAGCCAC 3839
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3840 TCTGAGCCTCAGTTTCCCCGGGAGATAAAAACAGAGACAGTATCTGCAAACTCAACAGGGCATTATGGTGAAGA 3913
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3914 AATGAGAGGACTCAGGAACATGTTAGCTGTCACAGCCTTAGCCACTGCCAACTCCAGCCAGGCAGCTGGTCAAC 3987
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3988 ATTGCCGAGCACCAGCCAGGTGACAGGAGGACAGAGGGCTCGGGGGAAACCAAATCCATCCCCCCAAACAAAAG 4061
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4062 AAAAACACAAACAAAAATAGGCACCAGAGCCGCCGGACGTGTACAAAGACTGTGTACGTTCTGCCTGTGGACAG 4135
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4136 AGCCCAGGAAGAGCACCCTGGCTCCTGTGCTCCACGCCTGCAGCTCATCTGGAAGGTTCCCTGTCTATGGCAGC 4209
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4210 CAGGTACCCAGGCCAGCCTGCAAAGGCCCAGTAACAGAACTTGTGTCTAAGATAGAACTTCATAGCTTTGTGCT 4283
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4284 GCCAAGCCCACCTGGAGCCCCCTTTAAGCCTTCTTTTGTTTGTTTGTTTGTTTGTTTTGAGACAGGATCTCATT 4357
Query 220 ----------------- 219
Sbjct 4358 CTGTTACTCAGGCTGGA 4374
