Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001754567.1
- Aligned Length:
- 3873
- Identities:
- 193
- Gaps:
- 3655
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTACGCTACCCAGCATCCTCGGCGCGGCCCGGAGGCTATGCGACCCTGCGCGTCGCATCCCCTCGGTGGACTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACTCCCCAGAGTCCTCGGGAGTCGTCCAGGTACACGCCCCAGAATATTGGTCATAGCGGTCCACCCGGGACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCGACCCGGAATCCTTGGAAGGACTTCTCGGAAGGACTCCTCTCTGACAGGTGGGGCGAGCCTATGGTCGTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGACGTGGAGGGATCCTTTCAGAACCGGCGATTTCTTTTATTTAGTAGTGACATAATATTCTTCACTGTGGCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCCATTGTGACCCAGACCAATCTACTTAAGGTCCGCAAATACTGCTCACGTTCTCCCATGAAGTCCATCATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGGAGTGTTTTCCTTGTAGGATTACGCTGCTCTCAAGTGCATACATGATGATCTTTTTGTCCAAGCATCAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTGATCCCAGCATCTTCACAGTACCAGCCTTTCCCCAAGATCCTCGCCAGAGAAAAGGGTTACCCAGATCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGCCACTGGTGAGTTGCTTTGTTGTCATGTACTGGGTGGACCTTATCATCTCATCCTCTTCATCCCTGTTATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACGTATAACCCAGTCATCCTGAGCATCTAGAACCTTGTAGCCTGTGTCTATGCCACTCTCGTTCCATTGGTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATCCGCTCTGATAAAAGAATAGTTAATATTCTCCAAAAAATGGAATTAAAGTGCTATAATTTTTTAATGTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGTGATGAAAAATATTTCTAAAAATTAGTCTCATTCTATAGTTAAATTGTTCAAGTAGCCCCAGATTTAGCTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTGAGTTTAAATAAAATGCGTGGAATTACACTTTTATTATATTTTTATGCTTCTGAAACTGAGGCATCTAAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTATGTAGTTTCTTCAGTTCAATGTTCACCATAGATTGACATTTCAGATATCAAGTCTTTTGCACTTTTATTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTATGTTAACTTTGTACAAGAAAATGTTTCTCTCTTTTTGAAGTACATTCTTAAAAAATTTGTTTTGGTAATCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATCTCTCAATGTTTTTACTTTTGAAAATATTTACTTACTCTGTTTATGAATGATACTTTAGCTAAATATTCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTCTAGCTTTTAAGCCATGCTTGCTCATTGTAACCTCCCTGACTAAAAAAAATTATGTCAATTTGGATTTTAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTAATCTAGAATTCATTTTAAAGGGTTTTAAATGAAATTTATATGTGGCTAGATACTGTTTTGGTAATACTCG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAGTTTCCCGCCTCTATTGGGATATTATTGACAAAAATTTTGTATATTTATGGTGCACAATATGATGTTTTGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGTATAGACACGTGCACGCAGACACATAAACACACACACACACACACATTGTAAAATTACCAAAATCAAGCTTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATAACATGTCAATTACTTCTCATACAAGGGTATTTTTGGTGTATGGTGAGAACATTTGAGATCTACTTCATTAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATAATTTACTTATACAATACATATTATTAATATAGTCTCTATGCTGTATACATATATTTATATTAACTTCTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTGTTATTGTTGGAGACAGTTGTCTGTCTTTGTTCCCCAGGCTGGAGTGCAGTGGCATTATCATAGCTCACTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAACGTCAAACTCCTGGGTTCAAATCATTCTCCCACCTCAGCCTCAAAAGTAGCTAGAACTACAGGGGTGCACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACTATGCCAAGCTAATTTGTAGGAACAGAGTCTTGCTATGTTACCCAGGCTGGTCTTGAACTCCTGGCCTCAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAATCCTCCTGCCTTAGCCTCCCAAAATACAGGGATTATAGGCATGAGCCACATGCCTAGCTTTATAACATTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTTATTCATTTATGTGTTGATGGACATTTACATTGTTTTCATATCTTGTCTATTGTGAATATTGCTTCAAGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACATAGGAGTGAAGATATCTCTTCAATATGTGATTTTATGTTCTTTGGATATTTAACCATAGGTAGGATTCCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATCATATGATAGTTTTATTTTTAATTTTTTGATGAATAATCATGCTGTTTTCCATAATGGCTTTACCAATTTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATTCCCAGTGACAGTGTACAAGGTTCCTTTTCTCTCCATCATTGATAACATTTGTTTTCTTTTGAATTTTTAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TAAACATTACCCTAACATGTGCTTGAGGTGCTATCTCATTTTGGTTTTGATTTGCATTCTCCTGATGATTACTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGGCTTCTTTGAAAAAGGATCCATTTAGATTATTTGGCTACTTTTAAAAAGAATGTGTTATTTTTATTGTTAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTTATTCAGAGGGGGTTATATTTTATGAATTTCTTACAGATTTTGAATGCTAACCCTTTATCTGATATTTGGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTACAAGTATTTTTCTTCGGTTCTGTGGATTGCCTTTTAAATTGATTGACTGTCTTTTGCTATGCAGTAGAAAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTTTTAGTTTGATGTCGTTTCATTTTTTTTCTCCCTGGGCTTTTAGTGTCAAATACAAAAAATAATTATTGCCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAACAATGCCAAAGAATTTTCCCCAATGTTGTTTTCTAAAAGTTTTATGGTTTCAGGTCCAATATTGAAGTCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTAATCTCTTAAGTTAATTTTTGTGTATTCTGTAAAAGATGGGTTAAATTTTTTTTGCATGTGTATATCCAGTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCCCATCACCATTTATTGAACAGTGTATTCTTTCTTCACTGTATATTTATATATCTTTGTTGAAAATTAGTTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTGTGTTCAGATGGATATTTCTGAGCTCTCTATTCAGTTTCATTGGTCTATGTGTCTGTGTTAATGCCAGCAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CATGCTGTTTTGATGACTGTAGCTTTGTTATATCATTTGAAATTAAGAAGTTTGATGCCTTCAGCTTTGTTCTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCTCAAAATTCTTTGGTTATTTTGGGTCTTTTCTAATTCCTTACAAACTTTAGAAATTTTTTATTTTTCTGGAA 2960
Query 1 --------------------------------------------------------ATGGAGTCTCATTCTGTC 18
|||||||||||.|.||||
Sbjct 2961 AATGATATTTTAATTTTGATGGAGATTGCTTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTGTC 3034
Query 19 -------GCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGA 84
||||||.||||||||.||||...|||||||.|||||||||||||||..||| ||..|| ||||.|.|
Sbjct 3035 ACCCAGGGCCCAGGCTGGAGTGCAGTGAGGTGATCTCAGCTCACTGCAACCTCCACCT-TCCTGGTTCAAACAA 3107
Query 85 TTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTT-TGTA 157
|||.||||.|||.||||||.|||||||||||||||||||..|||||.||||||||.||||||||||||| |||.
Sbjct 3108 TTCCCCTGACTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACGCCACCATGCCTGGCTAATTTTTTTGTGTG 3181
Query 158 TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------ 219
||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||
Sbjct 3182 TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGACTGGTCACGAACTCCTGACCTCAAGCAATCCACCCAC 3255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3256 CTCGGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGCACCCGGTGAGATTGCTTTAAATCTTTATATC 3329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3330 ACTTTTAGTAGTATGAATGTTTTAATATTAATTTATCCAATCCATGAACACTAAGTTTTTTTTGTCTCTTCTAT 3403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3404 AATTGCCTTTGCCACTATTTTAGAGTTTTTATTGTACAAATCTTTTACCGTCTTAGTTATAAGTATTATTTTTT 3477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3478 ATGTTATGGCATATGGAATTTTCTTAATTTTTCCCATATATTTTGTTGTAAGTGTATAGAAATGCAATTTATTG 3551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3552 TTTTGTACATTGATATAGTATCCTGCAACATTGCTGAATTAGTTTATTAGTTTTAAAAGTTTTTTTCCTGTAAT 3625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3626 GATGAGCACACGGGACTGTGTTTACACACTCATTAATATTCTGTTAACATATCACAGTGCCTAAAAATGTGCTC 3699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3700 TGTTGTATTTCTGCGGTGACCAATTTAATGGCATCTTTTAGTCCTAATTTTTTTTTCTTTTAAAATACTTTTGT 3773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3774 CTGGTATTGTATAATGGTGTGTTACTTTTCAGTTGTGCTACACATTTATTTCCAGGCAGAGTTAGTCAAGCTTT 3847
Query 220 ------------------------- 219
Sbjct 3848 CTAATAAAGTTATTTAATACCTTTA 3872
