Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_001755092.1
Aligned Length:
3491
Identities:
188
Gaps:
3277

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGGCGTGAGCCACCGCGGCCGGCCTGTCTGCACTCTTTATTCTTTAACTTTCGTTACAGTGTTACATACAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGTGCACAGAGCAGAAGGGGATGGCTAGCAAGTTACCACAACGCCTGGCAGAGAAGCAGAACTCTGGACATCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACGAGCCCTCCTGGCGCCCCGCCCTGCCCCCCCGGGGCTGCTCTGTTTTTCATCTGGCTTTCCTACCAGTGCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAACGGAAGGAGGACTTTTTCTGGAAAATCAGTGTCTGCGCTTCCCACCGGGCGGGTTGGACCTGAAGACACG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCGTCCCGCGGAGAATACGCGACACCGTGACCGACACGCGGCAGTCCTGCCTTAGAAGCGCGGCCGGGCCGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCGGGACCCGCAGCCTGGGGACCTTCCTCGCGCCCCAGAGGGGTCTGGGTGGAACGGGAAAATTAAAAATTAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAAAAAAAAAAAAACGGAAAGGCAAGAAAGGAAGAAGTCCGCTGGAGAACTCCGTGCGAAGGCCCCACTCCTAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACGTCCCCGGCCTCAAGGGGAGACGAGGAAGAGAGCGGCCCAACCTGGGCCTGGGAGTATCGTGACCCATGTGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTAAAGAACTAAAACGTGGCGTTAAAAATAAGTGGACGGGACACCATCAGAACTGTTTTTTTTGTTTGTTTTGT  666

Query    1  ------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCC  68
                  |||||||||||.||||||| ||||.||||||||.|.||||..|||||.||||||||||||||||..||
Sbjct  667  TTTTAGATGGAGTCTCACTCTGTCG-CCAGGCTGGAGTGCAATGGCGCGATCTGGGCTCACTGCAACCTCCACC  739

Query   69  TCTCGAGGTCAAGCGATTCTCCTGCCTCGG----------CCTCCGGAGTAGCTGGGATTACAGGCACACGCAA  132
            ||..|.|.|||||.||||||||||||||.|          |||||.|.||||||||||||||||||||..||.|
Sbjct  740  TCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGCACCCTCCTGTGTAGCTGGGATTACAGGCACGTGCCA  813

Query  133  CCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAAC  206
            |||.|.|.|.||||   |||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  814  CCACGGCTGCCTAA---TTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAAC  884

Query  207  TCCTGACCTCAAG-------------------------------------------------------------  219
            |.|||||||| ||                                                             
Sbjct  885  TGCTGACCTC-AGTTGATCCACCCGCCACAGCCTCCCAAAGTTGGAATTAAAGGTGTGAGCCACCGCACCCTGC  957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  958  CACACTGTCAGAATTGAGGAGGCAGATATGAGAAACATCTTAGGAATAAAAAAGAATAAATGAATTTGAAAACA  1031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1032  ATGAATAGGCTAAGCAGCAAATTAGATGCAAATACATATAAAATTAGCGAACTGGAAGATATATTTGAAGAAGT  1105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1106  CACCCAGAGTGCAACACAGACAAAGGGTGAAAAATAAGTTCTCTTTAGTGGTTAGCATTGTGATGGAGTAAAAA  1179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1180  GGCCCCACGTGGCCTAACTGGGGCTCTAGGAGGAAAAAAAGTGGATTAAATGGGCCAAGGTAATAGGGAAGAGA  1253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1254  TGTGAATGGAAAGGCACCATTTCTCAGACTCTGAAGCTTCAGAGAATCTAAGCAGAGTGTGTTTGAAGAAAACC  1327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1328  ACATCTGGACACACCTGTTGTAACTGGAGATTCTCAAAGACAAAGATTATAAAAGCAACTGGAGAGAAGAATGA  1401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1402  GTAACTGTTGAACGGCACTGAAACCAACACCTAAACAGCAATAGGGGAAGCCGTGAGAAGCAGAGGTCTCAAAT  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  ACCTGGGAGGAAACAGCTTTCAACAAGAACTGTTCATCCCATGATATACCTTTCAAGAATGAGAGTAAAACAAA  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  AGCATTTGTAGTTAAACAAAAACTAAGACTTCCACTTTGAGCCACGACAGAATAACTGGTCCAGATTTACTCTC  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  TCACCTTAAACAACTAGAAAGAAGGACAAAATATATGCAAAAATGTCTTTTGAGACATGGGACAGCGGTCAGAA  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  TTGGGCAGCAGTTACTGAGAGAGGAGAAACTAATGAGGAGAGACCTTCCAGCCCCTGGCTACTGTCTGGAGAGG  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  AGCTCCAGGCCAGAGCCTGAGAGGGGGTACCCAGATAAGGCGGGGTCTTGCTGCGGCAGAGACTGAGTTATAAG  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  TTGGGGGAAGCCAAGGCAACCAGAATTTTCAGGGCTGAGTACAAGAGAAGAGGGAGCTACAGAGAGAGAAAGAG  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  ATGGGGAAGGAGAGAAAGAGATGGGGGAGGAGAGAAAGAGATGGGGTGAGAGAAGGCGAGAGGGAGACCCACCC  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  AGAGAACTGTGGCTGAGCACTGATCTACGCATGCCTATGAAGAAATTACCTGAGGGGAAAAGAACCACTAGAAA  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  GGAGGAGGCAGAACATCCGGAGGAGCTCGAACAGGGCTGGGATTGTTCGTGTTCCCACAAGCCAGAGTGGAAAG  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  ACCTCCTAATTCAAAGGGCATCGTGGAGGCTGCAGCAGGGTAGTGTGTCAGCAATGGGGCCAGATTAGCCCCAG  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  GCTGAAGGACCCACACTAACGAGGCTTCTAAGCAATCCTCAAAAGGATTCCAACACAACCCAAGAATATTCAAA  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  GTAATACCAAAAATTCAGCACCCACCCATGTACCTTTCACAATGTCTATACCATTCAATCAAAAACTATCACAC  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  ATAGAAGCAGGAAAATATGATTCATACCCAGGGTCAAAATCCATCAATAGAAACAGACCCAGAGAAGACAGATA  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  CAATGGGATTTGTATACAAGAACAGTGAGGCAGTGCTAACTAGATTTCATATGCTCAAAAAGGTAGAAGAAGGC  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  ATGGGCGTGATGAAGAGGTTCTTTTTCAATGAACATAAAACAATTGCCAACATTCCTTAACAGCATATAAAATA  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  GTGGTACATCTTAAAAGTGGTGCTACCTTAAATTTTTGGTGAAATGTGGTAACAGCATCTATTACAACCTGCCT  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  GGTGTTTATCCCCCTTGGAATGTAACCATTACTTTAATTTATTTATCATTTTAGAATGAAGTTGGGAGCAAGAG  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  GGAGTGGACTCTCATTCACTGACTTACTCATTCTGTTATCACATGCGTACTGAAAATTCAGAGTAAAACCTCGT  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  ACTGTGCAACCCAGAATTTACCAAGATGAGAATAATGAGATATATAAACCAATAACTCTACACAAAGTGCTGCA  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  AGAGAAGATTAACATGAGACAGAAGGAGTTCAGAGGCGAGGAGAAGTCAAGGCTGGCCACACAGCAGAAGAGGA  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  ACTTTGGCTGGGCTTGGATGATGGGGCATTTGGACAAGTGAAGCAGTGGAGAATTTCTTTGAGGGACCTGGGCC  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  TCCACCAGCCCTTTGTATGAATTAGAAAGGGACTTTTTCTCTGTTGCCCAACACTGCAGGTGCACTACTTGGGA  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  AGTGAACGGCACCTTTGAAATGAGGTGCTACTGAAACAAAAGCCTAAAACTGGGGAAATCATCTTAGGGATGGA  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  AGTGTGGGCTAAGAGACCTCAATGAGACTGATAGTAAAGTCTCAAAGTTCAGTGAGGGAACACCTGGAAAGATG  3251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3252  GAAAAGAGTGACTGCTGTCATGTAGCAGCAGAAACGTTAGTTAAAATATCCTTTGGGGAAACCAGGACACCAAA  3325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3326  AAATATACCACATGAGCTTGTGGGTTTGACTGAAGAGACTTTGAGGCAGACTGTCATAATTGGCAACTGCTTTC  3399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3400  TTTTAGCTGTGTGTAATATAGATAAAATAATGAAGGAATGTCCCATTTTTGAGCAAAATTTAAAGAAAATATAA  3473

Query  220  -------------  219
                         
Sbjct 3474  AGGTGTCAGGACT  3486

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