Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001755092.1
- Aligned Length:
- 3491
- Identities:
- 188
- Gaps:
- 3277
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGGCGTGAGCCACCGCGGCCGGCCTGTCTGCACTCTTTATTCTTTAACTTTCGTTACAGTGTTACATACAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGTGCACAGAGCAGAAGGGGATGGCTAGCAAGTTACCACAACGCCTGGCAGAGAAGCAGAACTCTGGACATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGAGCCCTCCTGGCGCCCCGCCCTGCCCCCCCGGGGCTGCTCTGTTTTTCATCTGGCTTTCCTACCAGTGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACGGAAGGAGGACTTTTTCTGGAAAATCAGTGTCTGCGCTTCCCACCGGGCGGGTTGGACCTGAAGACACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCGTCCCGCGGAGAATACGCGACACCGTGACCGACACGCGGCAGTCCTGCCTTAGAAGCGCGGCCGGGCCGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGGACCCGCAGCCTGGGGACCTTCCTCGCGCCCCAGAGGGGTCTGGGTGGAACGGGAAAATTAAAAATTAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAAAAAAAAAAACGGAAAGGCAAGAAAGGAAGAAGTCCGCTGGAGAACTCCGTGCGAAGGCCCCACTCCTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGTCCCCGGCCTCAAGGGGAGACGAGGAAGAGAGCGGCCCAACCTGGGCCTGGGAGTATCGTGACCCATGTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAAGAACTAAAACGTGGCGTTAAAAATAAGTGGACGGGACACCATCAGAACTGTTTTTTTTGTTTGTTTTGT 666
Query 1 ------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCC 68
|||||||||||.||||||| ||||.||||||||.|.||||..|||||.||||||||||||||||..||
Sbjct 667 TTTTAGATGGAGTCTCACTCTGTCG-CCAGGCTGGAGTGCAATGGCGCGATCTGGGCTCACTGCAACCTCCACC 739
Query 69 TCTCGAGGTCAAGCGATTCTCCTGCCTCGG----------CCTCCGGAGTAGCTGGGATTACAGGCACACGCAA 132
||..|.|.|||||.||||||||||||||.| |||||.|.||||||||||||||||||||..||.|
Sbjct 740 TCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGCACCCTCCTGTGTAGCTGGGATTACAGGCACGTGCCA 813
Query 133 CCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAAC 206
|||.|.|.|.|||| |||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 814 CCACGGCTGCCTAA---TTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAAC 884
Query 207 TCCTGACCTCAAG------------------------------------------------------------- 219
|.|||||||| ||
Sbjct 885 TGCTGACCTC-AGTTGATCCACCCGCCACAGCCTCCCAAAGTTGGAATTAAAGGTGTGAGCCACCGCACCCTGC 957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 958 CACACTGTCAGAATTGAGGAGGCAGATATGAGAAACATCTTAGGAATAAAAAAGAATAAATGAATTTGAAAACA 1031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1032 ATGAATAGGCTAAGCAGCAAATTAGATGCAAATACATATAAAATTAGCGAACTGGAAGATATATTTGAAGAAGT 1105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1106 CACCCAGAGTGCAACACAGACAAAGGGTGAAAAATAAGTTCTCTTTAGTGGTTAGCATTGTGATGGAGTAAAAA 1179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1180 GGCCCCACGTGGCCTAACTGGGGCTCTAGGAGGAAAAAAAGTGGATTAAATGGGCCAAGGTAATAGGGAAGAGA 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 TGTGAATGGAAAGGCACCATTTCTCAGACTCTGAAGCTTCAGAGAATCTAAGCAGAGTGTGTTTGAAGAAAACC 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 ACATCTGGACACACCTGTTGTAACTGGAGATTCTCAAAGACAAAGATTATAAAAGCAACTGGAGAGAAGAATGA 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 GTAACTGTTGAACGGCACTGAAACCAACACCTAAACAGCAATAGGGGAAGCCGTGAGAAGCAGAGGTCTCAAAT 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 ACCTGGGAGGAAACAGCTTTCAACAAGAACTGTTCATCCCATGATATACCTTTCAAGAATGAGAGTAAAACAAA 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 AGCATTTGTAGTTAAACAAAAACTAAGACTTCCACTTTGAGCCACGACAGAATAACTGGTCCAGATTTACTCTC 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 TCACCTTAAACAACTAGAAAGAAGGACAAAATATATGCAAAAATGTCTTTTGAGACATGGGACAGCGGTCAGAA 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 TTGGGCAGCAGTTACTGAGAGAGGAGAAACTAATGAGGAGAGACCTTCCAGCCCCTGGCTACTGTCTGGAGAGG 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 AGCTCCAGGCCAGAGCCTGAGAGGGGGTACCCAGATAAGGCGGGGTCTTGCTGCGGCAGAGACTGAGTTATAAG 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 TTGGGGGAAGCCAAGGCAACCAGAATTTTCAGGGCTGAGTACAAGAGAAGAGGGAGCTACAGAGAGAGAAAGAG 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 ATGGGGAAGGAGAGAAAGAGATGGGGGAGGAGAGAAAGAGATGGGGTGAGAGAAGGCGAGAGGGAGACCCACCC 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 AGAGAACTGTGGCTGAGCACTGATCTACGCATGCCTATGAAGAAATTACCTGAGGGGAAAAGAACCACTAGAAA 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 GGAGGAGGCAGAACATCCGGAGGAGCTCGAACAGGGCTGGGATTGTTCGTGTTCCCACAAGCCAGAGTGGAAAG 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 ACCTCCTAATTCAAAGGGCATCGTGGAGGCTGCAGCAGGGTAGTGTGTCAGCAATGGGGCCAGATTAGCCCCAG 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 GCTGAAGGACCCACACTAACGAGGCTTCTAAGCAATCCTCAAAAGGATTCCAACACAACCCAAGAATATTCAAA 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 GTAATACCAAAAATTCAGCACCCACCCATGTACCTTTCACAATGTCTATACCATTCAATCAAAAACTATCACAC 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 ATAGAAGCAGGAAAATATGATTCATACCCAGGGTCAAAATCCATCAATAGAAACAGACCCAGAGAAGACAGATA 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 CAATGGGATTTGTATACAAGAACAGTGAGGCAGTGCTAACTAGATTTCATATGCTCAAAAAGGTAGAAGAAGGC 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 ATGGGCGTGATGAAGAGGTTCTTTTTCAATGAACATAAAACAATTGCCAACATTCCTTAACAGCATATAAAATA 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 GTGGTACATCTTAAAAGTGGTGCTACCTTAAATTTTTGGTGAAATGTGGTAACAGCATCTATTACAACCTGCCT 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 GGTGTTTATCCCCCTTGGAATGTAACCATTACTTTAATTTATTTATCATTTTAGAATGAAGTTGGGAGCAAGAG 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 GGAGTGGACTCTCATTCACTGACTTACTCATTCTGTTATCACATGCGTACTGAAAATTCAGAGTAAAACCTCGT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 ACTGTGCAACCCAGAATTTACCAAGATGAGAATAATGAGATATATAAACCAATAACTCTACACAAAGTGCTGCA 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 AGAGAAGATTAACATGAGACAGAAGGAGTTCAGAGGCGAGGAGAAGTCAAGGCTGGCCACACAGCAGAAGAGGA 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 ACTTTGGCTGGGCTTGGATGATGGGGCATTTGGACAAGTGAAGCAGTGGAGAATTTCTTTGAGGGACCTGGGCC 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 TCCACCAGCCCTTTGTATGAATTAGAAAGGGACTTTTTCTCTGTTGCCCAACACTGCAGGTGCACTACTTGGGA 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 AGTGAACGGCACCTTTGAAATGAGGTGCTACTGAAACAAAAGCCTAAAACTGGGGAAATCATCTTAGGGATGGA 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 AGTGTGGGCTAAGAGACCTCAATGAGACTGATAGTAAAGTCTCAAAGTTCAGTGAGGGAACACCTGGAAAGATG 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 GAAAAGAGTGACTGCTGTCATGTAGCAGCAGAAACGTTAGTTAAAATATCCTTTGGGGAAACCAGGACACCAAA 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 AAATATACCACATGAGCTTGTGGGTTTGACTGAAGAGACTTTGAGGCAGACTGTCATAATTGGCAACTGCTTTC 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 TTTTAGCTGTGTGTAATATAGATAAAATAATGAAGGAATGTCCCATTTTTGAGCAAAATTTAAAGAAAATATAA 3473
Query 220 ------------- 219
Sbjct 3474 AGGTGTCAGGACT 3486
