Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001755161.1
- Aligned Length:
- 2253
- Identities:
- 189
- Gaps:
- 2037
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGACGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACAGCAAAGGGAGACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCCTCTGCATGGCCCGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTGCTCCTCACAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTG 1628
Query 1 ----------------------------------------------------------ATGGAGTCTCATTCTG 16
|.|||||||...||||
Sbjct 1629 GAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTG 1702
Query 17 TCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCC 90
||.|||||.||||||||.|||||||.||||||||||||||||||||||.|||||.|.||.||||||.|||||||
Sbjct 1703 TCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCC 1776
Query 91 TGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAG 164
||||.|.||||||.||.|||||||||||||||||....||.|||||||||.||||| |||||||.|||||||
Sbjct 1777 TGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAA---TTTTTGTGTTTTTAG 1847
Query 165 TAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGA----------------CCTC------ 216
||||||.||||||||||||||||||.|||||||||||.|||||||||| ||||
Sbjct 1848 TAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTC 1921
Query 217 ---AAG-------------------------------------------------------------------- 219
|||
Sbjct 1922 CCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGAC 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 TCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAG 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 GCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCA 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 GCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCC 2217
Query 220 --------------------------------- 219
Sbjct 2218 TGATAATAAAACTCTGAGGCTTTGGTGAGCGCA 2250
