Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001755380.2
- Aligned Length:
- 5221
- Identities:
- 188
- Gaps:
- 5007
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCTGAGCTGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGGGCCGCATGTGAGCAGGCCGAAGCAGACG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGTGCACCTGGCCAGGGAGATGCAGGCCGAGTACTGGTCAGTGTCGGCCAAGACTGGCGAGAACGTGAAGGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCC 2442
Query 1 -------------------------------------------------------ATGGAGTCTCATTC-TGTC 18
|||||||.|||..| |||.
Sbjct 2443 CCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTT 2516
Query 19 GCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCT 91
||||||.||||||||.|.||||.|.|||||||||||.||||||||||||||| |.||| |.|||||||||||||
Sbjct 2517 GCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTC-CCAGGTTGAAGCGATTCTCCT 2589
Query 92 GCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGT 165
|||||.||||||..||||||||||||||||||||..|.|.||||||||.|||||| |||||||||||||||
Sbjct 2590 GCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAA----TTTTGTATTTTTAGT 2659
Query 166 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------- 219
||||||||||||||.|||||||||.|||||||.|||||.||||||||.||||.|
Sbjct 2660 AGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCT 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 CCCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 TTTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTC 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 CCCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCC 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 GGGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTC 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 GTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATG 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 ACTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCC 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 CCCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGG 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 ACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGC 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 ACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTG 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 CCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAG 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 TTTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAG 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 CTCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGAC 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 TGCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCA 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 GGTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTC 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 CCTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCT 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 AGAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCT 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 GCAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGG 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 GAGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCAT 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 CTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTT 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 TCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCA 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 GCCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTT 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 CCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGA 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 GACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTC 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 TGGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTC 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 ACAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCT 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 CTGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCC 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 ACCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAG 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 GAAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCA 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 TGTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCC 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 TGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGAC 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 CCAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAG 5027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5028 CTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCT 5101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5102 AGAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACA 5175
Query 220 ----------------------------------------- 219
Sbjct 5176 AATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA 5216
