Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001755381.2
- Aligned Length:
- 5135
- Identities:
- 188
- Gaps:
- 4921
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCTGAGCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATAT 2368
Query 1 -------------------------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGA 30
|||||||.|||..| |||.||||||.|||||
Sbjct 2369 TTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGA 2442
Query 31 GTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCC 103
|||.|.||||.|.|||||||||||.||||||||||||||| |.||| |.||||||||||||||||||.||||||
Sbjct 2443 GTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTC-CCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCC 2515
Query 104 GGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTT 177
..||||||||||||||||||||..|.|.||||||||.|||||| |||||||||||||||||||||||||||
Sbjct 2516 CAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAA----TTTTGTATTTTTAGTAGAGATGGGGTT 2585
Query 178 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------- 219
||.|||||||||.|||||||.|||||.||||||||.||||.|
Sbjct 2586 TCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTG 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 GGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGG 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 GATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 CATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTT 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 TATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCG 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 CCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGG 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 GTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACAT 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 TAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGG 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 AAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTT 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 GATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGA 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 GCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGA 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 TGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATG 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 GTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAG 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 CCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGC 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 ATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTC 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 GGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTG 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 CCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAG 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 CTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGA 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 GTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAG 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 AATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGG 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 GCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGC 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 CAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCT 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 GGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTG 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 AAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGG 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 CTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCT 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 GCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCC 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 CCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGG 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 AACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACA 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 GTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAG 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 ACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTC 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 TCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTC 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 ACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGC 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 CAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTG 5027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5028 GGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAA 5101
Query 220 ----------------------------- 219
Sbjct 5102 ACTTCATTGCTTAAAGCAACAAGCATGTA 5130
