Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_001756660.1
- Aligned Length:
- 4392
- Identities:
- 194
- Gaps:
- 4176
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACCTCATGATATGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCATGCCCAGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTTTATAAGGTTCATCCCATTATTGATATTCTCTAATTGGTGAGACATTGTTCCCACACTTTCGTTAGTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTGACATGGTTCTTTTCTTTTTCTTGGGAGAGGGTCTCTCTGTCGCCCAAGCTGGAGTGCAGTGATGCAGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCTCACTGCAGCCTCAACTTCCTGGGCTGAAGTGATCCTCCTACCTCAGCATCCTGAGAGGCTGGGACCATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCAGCCAGCTAATTTTTTAAATTTTTTGTAGAGATGGGGGTCTCACCACATTTCCCAAGCTGCTCTCAAACTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGCTCAAGCAATCCACGGGCCTCAGCTTCCCAGAGTGCTAGGATTATAGGTGTGAGCCACTGCACCAGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACACGTGGTTTCTCCCTTTGAAGTACTAGCCAGGCCTGACCATGCTTAGCTTCCGAGATCAGCAGGTTCCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGTGCAGCCTCAGATGCAGCATGTTTTAGGTCTTTGAACATATTTAAATGAGCTGACTGAACGTCTTTGTCTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAATTGCAGCATCGGGCTGGTCCCATTGGTGACTTTTCCCGTGTCTGGGTCGTCCTTTCGGTTTCCTTTCCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTCATAATTTGTTAAAACCTGGACATTTCACGGGCGATAATGTGGCAACTCCGGAAGTCAGATTCTCTTCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCAAGGATGTGTTGTTGTTGTTGCCTGTTGGAGCTGTTTCTTTGCTGGGTGACTTTTCTGAACTAATTCTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAAGCATTAATGTCTCCATTCCCTGCGAGCTGTGGCCACTGAAGCCGCTCTTCAGTTACGGCAGTGGTCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGACTGGTCAGAGAGTTCCTTAGGTGCCTGGAAGCGAAGTCTTTGCCGAGTGGGTCTCTCTCTGTGTGCCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGTGGCTTCAGTGCTCGGCTAGGCAGTGCTCAACTTTCCCTTAGCCGTCACCTGCTGTCTGCACAGCACCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGTCAGTCACGGGTGAGGGCTCAGGGCCTTGCCGGCCTTCCTGAATATGGGCACAGCTGCAGACAGCCTTACCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGTGCAGGGCACCTAGATTCCCAAGAAGGGGCAAGAGCTGTTCAAAACCACTACAAGCTGGACATGGTGGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACACCTGTAGTGTCAGTGACTCAGAAGGCTGTAATGGGAGGATGACTTGAGGCCAGGAGTTTGAGACCTAGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCCCATCCCCCACCCAAAAAAACAAAAACAACAACAAAAACTCACTGTGGACCGCTCATGCCCCAGCTGCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTTTAACCCCAGCTGTTATCCATCACCACAGGCAGCTTCGATTTTCAATCATGGATCTGATGACTTTCAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGGCAAGTGGGG 1480
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1481 TCTCCCTGGGAGCTAGCAGACAGGTGAAAGACTGACAGTTCTTGGGGAATTAGGCTTTTCTTTTGTTTTGGAGA 1554
Query 2 TGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
|||.||.||||.| |.||.||||||||||||||.|.|||..||||||||||||||||||||||||||||| |.|
Sbjct 1555 TGGCGTTTCATACTTATCACCCAGACTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCTGCCTC-CCA 1627
Query 75 GG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT 147
|| ||||||.|||||||||||||.||||||.||||||||||||||||||||||.|.|.||||.||||.|||||
Sbjct 1628 GGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCCCAGCTAA- 1700
Query 148 TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 219
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||..|||||||||.|
Sbjct 1701 -TTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACATCTGACCTCAGGTG 1773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1774 ATCCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCTGCCCAGCCCAATTATAGATTT 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 TTTAGGTTTAGGTGTTGACAGTAGCTCTCACCTCAGCCTGTTCTCTCTCCTTGTCATGCAGCCCACAGGGGAGA 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 TGGTCAGGCCAGTGTGGGGGCTAATGAATAAATGCTACACTGTGCCCACTCAGGTCACGACCCCCAGGAGACCT 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 GGAGGACTGAATGCTGCTGCCCCCAAGGAGGAGGCTGCCGTCTTATCCCAGGAGGGAGAGCAGGTGAAGTCCCC 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 AGGGGAGGAAGCACCTAGCCCCATTCCTGCTGAGCAGGAGGTGGCAGGTACCCCAGACTGGGAGGTAAGGACAG 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 CCCGGGGCTTCGACTGAACGTCTCCAGCGTGGGTCCAACTGAGCAGCCATGGAGCACTGCAGAGTGGGAGGCAG 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 CAGGGCAGGGAGGCAGTGCTGGAGGCTGGCTCAACCCCAAGACCAGCAGGCCAAGCTGCCATCCCAGGGGAGCG 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 AGGACGTCTGTGCAGAGCTGAGAGGCAGCAGCCATGTGTGAACAGACTGGGCCTCATCCTGGCCCCACCGACTT 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 TGTGTGGACAGAGCCTGTTTCCCTGTCTGTGCAACACAGAACCTGCCTGATCTCACTGCTGGATCCCTCTTCTT 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 CCTGCCAGGAAAATAAAAAGGTTCAAAAGGAAGTTGCTGCGTATCCATCTGAGGCCTCTGAGGACAGCAAAGAG 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 CAAAGGCCCTGGGACCGGGTCTACGTGCCCATGACAGAGCTCTGGCTGGACTGGTTCTGAGCCTCTAACACCCC 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 CAAGACTCAGAACCGTGAAGAAAATCTTTCCAATAAATCCAAGAGTTGCTGCTGCTATAGGCCAGGCTGCCACC 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 TTTCGGGGCCTCCGTCTTCAGACAAACCCAGCCTGGCTTCATCCACACTCCCTGTCCCCACAGCTGCAGGAACA 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 GCACTTCCTGCCACCGAGCCGTGTGACCACAGTGGATTGTCTCTGGAGGGGCCCAAGGGGGCCCTGGCCACCCT 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 TCTGACTGACTCGGTGCCAGGGGACAGACCAACGTCCCTCTCGTGCTGACAGCCGGGCCGCACCCTGGCATGAG 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 GGCATTTACAGAAATGCTGGCGGAACTGCTGCCAGGGAGGCTGTAGGGTCCTCTGGCAAAAGAGGCCTCAGGTG 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 GCTCCTCAGAGTGTCTGTGGTTCTCTGTCCCAGGCTGTTCCCTAAGAAGGTCTGCCCAGGACTCAGGTAATCAT 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 ATGCTCATTAGAAACTCTTGGGCACTGCCTGTGTGCCCAGCCCAGCCCATTATGTCGGTGAGGACAGATGTGGA 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 GGACAGCAGTCCCTGCCCTTGGTTGGGGCTCCAGGCCAGCAAGGGCCACAGCCCCAGAAGGCAGAGCAGGAAGA 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 CAGGACTCGGGGCAGGTGAAGCAGCCTTCTCGTTGGCAGAAGGGAAACAGAAGCCCGGGGTGGGGAAGGGTGGG 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 GAAGGGTGGGCCCGGGGTCACACGGGGTAATGGCAGAGCAAGGACTAGGGTCAGGGTCTCTGGCTCTCAGCTGC 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 CCATGCCACCTCCTCCTTCTCTGCCCGCCCCAGTGCCTTATGGGTCCAAGGTTGACTCCTGTCCCTAGGGCAGG 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 CCTGTGGGCCCTGCCTGATCCCTACTGGGAGGATGGTACCTAGGGTTGGAGCCAAACAAGTGTCCTCCTCCAGC 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 GCCAGCCTGGCCCTGAGTGCGAACTCGTCACTGGTCAGGGGTCCAGACAGCAGCATCCCTGAGGGCCCAGAGAG 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 GTGGCCAGTCCTGTGGTGAGGTTGAGAGGTGTCAACGTGCTGGCGGTCCTCGCTCGCTCTCAGCGCCTCCTCGG 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 CCTCAGCTTCTGCTCTGACCACACTTGAGGAGCCCTTCAGCCCAGCGCTGCACTGTGGGAGCCCCTCTCTGGAC 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 TGGTGGAGGCTGGAGCCGGCTCCGTCTGCTTGCGGGGAGGTATGGAGGGAGAGGCGTGTGCGGGAACCTGGGTT 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 GCTCGCGGGCCAGCACCAGTTCTGGGTGGGCAGGGGCTCAGCGGGCCCTGCACTCGGAGCGGCCGGCTGGTGCC 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 TCTGGCCCCAGGCAGTGAGGGGCTTAGCACCTGGGCCAGCAGCTGCAGAGGGGGCACCGGGTCCCCCAGTACTG 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 CTGGCCTGCCGGCGCTCACCACACTTGAATTGTCGCCAGGCCTCAGTCACCTCCCCGCGGGGCAGGGCTCAGGA 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 CTTGCAGCCTGCCATGCCCAAGCCTCCCTACGGTGGGCTCCCTGCGAGGCCCAAGCCTCCCGGATGGGTGCCTC 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 CCACTGCTCCACGGCACCTGGTCCCGTCCACTGCCCAAGGGCTGAGGAGTACAGGTGCCTGGTGTGGGACTAGC 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 AGGCAGCTCTGCCTGTGGCCCTGGCATAGGATCCACTAGGCGAAGCTGGCTGGGCTCCTGAGTCAGGTGGGGAC 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 TTGGAGAACTTTTATGTCTAGCCAGAGGATTGTATATGCACCAATCAGCACTCTGTGTCTAGCTCCGGGTTCGT 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 GCATGCACCAATTAGCACTCTGTATCTAGCTAATCTGGTGGGGACTTGGGGAACCTTTATTTCTAGCTAAAAGA 4363
Query 220 -------------------------- 219
Sbjct 4364 TTGTAAATACACCAATCAGCACTCTG 4389
