Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_002957596.1
- Aligned Length:
- 3486
- Identities:
- 188
- Gaps:
- 3272
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGCCCCTCACAGGGCAGGGAGCAAGTGGCAGCATCAGGGCAACGCCTTCTGGAAATGGCCCCTGAGCCCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACATGGCCACCCTCAAGGCCCCCACTGAGCAAGCGTTTCCTCTCTTCAAAGCTCCTGCAATCTGGGCTCCATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTGGTGAGGATGTGTAGGAGGCAGACCCCTGACCCCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAAAACAATCGGTACTTCCTTAAAAAGTTAAACAAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGACTCAGCAGCCCCACTCCTAGGTAGATACCCAAGAGAAAGAACGTCCACCGTAGCACGTTTCATGACAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGGGGGGAGACGGCCCAAAGGCCATCAACTGAGGAGTGGACGAATGAAGTGCGGCCCATCCTTACAGTGGGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAATGCCAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAATTTATT 888
Query 1 --------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC 48
| |||.||||.||||||||||||.||||||||.|||||...||||||
Sbjct 889 TATTTTATTTTAATTTTTGAGAGACAA--GAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTC 960
Query 49 GGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTAC-A 121
||||||||||||||||||||||.||.|.|||||.||||||||||||||.||||.|.|||||||||||||||| |
Sbjct 961 GGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAA 1034
Query 122 GGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGC 195
|||...|||.||||.||||.||||| |||||||||||||||||||||..|||||||||||||||||.|||||
Sbjct 1035 GGCGTGCGCTACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGGTCAGGC 1105
Query 196 TGGTCTCGAACTCCTGACCTCAAG-------------------------------------------------- 219
||.|||||||||||||||.|||.|
Sbjct 1106 TGCTCTCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATG 1179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1180 AGGTACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCTCAATTT 1253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1254 AAAAAACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAAACAAAA 1327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1328 AGACAAGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGCCCACGG 1401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1402 GGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCT 1475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1476 GTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGT 1549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1550 TGCAAAAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTT 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 GAGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCACCAGTGT 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 CCCCAGCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGC 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 TGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGT 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 TATGTAGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGCGGTGGG 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 CGGGGCCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTG 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 CCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCT 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 GACCCCTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTGGACTGT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 GCTGTCATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTTCTGTGT 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 CCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAA 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 ATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGC 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCC 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 TGTCCTCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAG 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 GGTGCCCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAGGAGACC 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 CCTCACCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGCAGGCAC 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 AGCACACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCGCTGCTG 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 GCAGGTCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTGTGGGAA 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 GTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGTTTAAGA 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 CAACGTGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCTCTCCTC 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 CTCACAGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGAACGCTT 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 TAGTCCAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCATACCTG 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 GCCTGGCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTGGGCTTG 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 GCAGCTGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCTGAGGGC 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 CGGCTGCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTCCCCCTC 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 CCTGTTCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAAGAGGCG 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 GCCACTGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCACGGAAG 3473
Query 220 -------- 219
Sbjct 3474 GGGTGGCC 3481
