Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_002958144.1
Aligned Length:
2700
Identities:
159
Gaps:
2518

Alignment

Query    1  ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA  74
                                             .||||||...|||||.||||||||||||||||||||| |.|
Sbjct    1  ---------------------------------CAGTGGCGCAATCTCAGCTCACTGCAACCTCTGCCTC-CCA  40

Query   75  GG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT  147
            || |||||.||||||.|||||||.||||||.||||||.|||||.|||||||.|.|||.||||..||||||||| 
Sbjct   41  GGTTCAAGTGATTCTTCTGCCTCAGCCTCCTGAGTAGTTGGGACTACAGGCGCCCGCCACCACACCCGGCTAA-  113

Query  148  TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--  219
              |||||||||||||||||||||.|||||||||||||.|||||||||||||||||.||||||||||||...|  
Sbjct  114  --TTTTTGTATTTTTAGTAGAGAAGGGGTTTCACCATATTGGCCAGGCTGGTCTCAAACTCCTGACCTTGTGAT  185

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  186  CCGCCCGTCTCAGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACCGCACCCGGCCCAAGTCTTTCTTTAT  259

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  260  AGCCTCCTACCCTACCAAGCCATCCAGTTGCATTTTCCCTCCCTGTCTTGAGTTCTTCTTTCCTAAGCTTCTGT  333

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  334  TGTAGACCTGGCCTGCTGGAGTGCTCTGCTCCCCTGGGAACCCTCTGGCTGGAGAGGCTCCTGAGCCACAGAAC  407

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  408  CAGAGAAGAGGAGAGTAATGCCAGAGGATCCCTAAGCACAGTTGTACAGGAAGCATGATGCTGGCATCTGCTCA  481

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  482  GCTTCTAGGGAGGCCTCAGGAAACTTAAAATCATGGCGGAAGGGATGCAGCAGTTCACATGGCTGGAGCAGGAG  555

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  556  CGAGACAGAGAGTGGAGAGGTGCTGCACACTTTTAAATGACCAGTTCTCGTGAGAACTCACTGTCATGAGAACA  629

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  630  GCATCAAGAGGATGGTGCTAAACCATTCATGAGAAATCCACCCCCGTGATCCAATCACCTCCCACCAGGGCCCA  703

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  704  CCTCCAACACTGGGGATTACAATTTGACATGAGATTTGGGCGGGGACACAGATCCCAAACCATATCACCCTCAG  777

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  778  TACCTGTTGCTGGCTGACAGTTGGTCAGTGTCTAGGGGAGAACCATTCTCAGCTTCAGTTCCACGATAGCGAAT  851

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  852  ACCATCTTGGCAAAAATCCCCTGGACAAGTCAGAGACCTCACTAAGTCTCCAGCATCTAGCCTGATGCCTGACA  925

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  926  CATACTGACCCTCAATAAACGGCTGTTCAACTGTGGGCACAGGAATGGTGAGGAGGCTGTGGGCACAGAGGACG  999

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1000  CTGGCCCTTCTTTGGAAGCAGATGAAGGTCTGGGTGTTGATGAGGGGTTCCTCGAAAGTCCCATGCTGCTCACA  1073

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1074  ACACCCAACACTCCTACAGACTGTGACCATGTTCTGTTGACAACTGAGCCTGCACAGGATCTTTATGCAGTAGG  1147

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1148  GAACCGGCCCGGATTCTCCACAGGGAGAATCTCCCAGATGTTTCCCCGCTTTCTGCCCCAAAGTCAAGATCAAA  1221

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1222  AGCAGTTGGCAGCTGCAGACATCAGCAGAAGTCAGTGGAACACAGTGTGGAACCATGTCGCGCTGGAGGAGGAA  1295

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1296  GTCTCGCGCTGGAGGAGGAAGTCTCACCCTTGACAGAGACTAGAACTGGGCCTTAGAAGCTTGAACCAACCTCT  1369

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1370  GTCCCTGCGAGAGCAGCACACTTTTGTGCTCCTCAGCCCTTGCGTCTTCTTTGCCTGGAATATGGCAAAACGTT  1443

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1444  TATTTTCCCCCACTAAATGAGGCTCCTCTAGGGCTGCAACTGTGTTTGCCCATCTCTCTTTCTCTAGCAGCTAG  1517

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1518  CACAGGGCTAGCAGTCGGTGCTTGTTGAGCCGGTGGGTGAAGAGACGAGAGCACACCTCCTGTGTGCCCGGCAT  1591

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1592  GGCGGGACCTGGTGCCGGCAAGTGGTGGGCTCTCTGGCCTCATGCTCTGCGCTGGTGATGTCAAGGGGTGGGCT  1665

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1666  TCTGTCCTGCCACTGATAGTAGGAGGGAAGGCCAGCAGGAAACGCCGAAACCTACTCAAGCTGCTGGAGAAGGG  1739

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1740  GGAATCCAGCCCTGTTTCAGGGGAAGGAGTATCCTGTGTTCTGAGAGCGAGAGAGCAGCTTAGCCGGCAAATCC  1813

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1814  TTAAATCCTTCAGAGATTACAGGATTGTGCAAGAGGGAAGGCCAAGAGGGGGACCTCTGAGGCAGCTCCAGCAT  1887

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1888  GGCCTGTTGTGTGCAGAGGACTGAGATCCCAGAACATGCCACACCAAGAAGACATGTCCCAAGGGGCAGTGGAG  1961

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1962  CCACAGCCACCAGAAGGGACCTGGCCCTGTCGGACCTGCTGAAGCTAGCCGTGGAGTGCAGGGGCTTTGTTGGT  2035

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2036  CTGGCTGCTAACCAAAGGGTGGCTAATGGGACCCTTTCCAGGGGCCTCTAGGGGATTTCAGTGGGGGCTTGCTT  2109

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2110  CGAGGCTCTATTACCACTGGACTGTTTACCAAGAGCCTCAGCCTGACAGAGATGGGAAGAGACGAGTGAGCATT  2183

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2184  TCTGACCCAACACCCCCACTGCAGAGTTGGGGAAACATTTACCCAAGATAGGAGGAATAAAAAGGAAAAAAATT  2257

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2258  GAATTTATTTCCAAAAAACATACCAAGGTGGACAAGATAGGAAACAATACAATTTATATTACAGTTTTATTATT  2331

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2332  ATTTAAAAATTTTATATTAACAAAATGAGATGGGATCTGCCTATGTTGCCCAGGCTGGTCTTCAACTCCTGGGC  2405

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2406  TCAATCTCCTCGGCCTCCGAAAGTGTGATTACAGGCGTGAGCCACCGCACCCGGCCCATATTACAGTTTCATAG  2479

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2480  TGTTTTTGATTACTCGTGGTAGGAGAAATGTGTCTTCTTTGCACTTGGGGTCTCAACGTCTCAGTCCTGCCCTA  2553

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2554  TGCCCCGAGACCCCAAGAGGCTTTCCCAAGGTCAGGCAGGGAATCCGCAGAGAGGCAGGGCTGGACTCCAGCAT  2627

Query  220  ------------------------------------  219
                                                
Sbjct 2628  CCTGACTCCCCAGTTCGTGCTCTGTGCTGCAGAGAC  2663

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