Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_002959067.1
- Aligned Length:
- 4290
- Identities:
- 79
- Gaps:
- 4203
Alignment
Query 1 ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
||.||||.|||.||||||
Sbjct 1 ------------------------------------------------------GCCACCACGCCTGGCTAA-- 18
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
||||||||||||.|||||||||||||.||||.||||||||||||| |||||..|||||||||||||||||
Sbjct 19 -TTTTTGTATTTTCAGTAGAGATGGGGCTTCATCATGTTGGCCAGG-TGGTCCTGAACTCCTGACCTCAAGTAA 90
Query 220 -------------------------------------------------------------------------- 219
Sbjct 91 TCTGCCTGCCTTGGCCTTCCAAAATGCTTGGGATTACAGGCGTGAGCCACTGCGCCTGGTCCCTATTTTCTTTT 164
Query 220 -------------------------------------------------------------------------- 219
Sbjct 165 TACAACAGACCTTGGGAAATATTTTCTTCCCCCAAGAGGTTGAGGCCCATGGAATGCATTAGGGGCAGGTGGGG 238
Query 220 -------------------------------------------------------------------------- 219
Sbjct 239 TGGTGGTGCTCTGTAGCCTTTAGGACTTCTAGAATCAGGCTTCTGGGCCACCTTCTTAGCAGGTGTATACCTCT 312
Query 220 -------------------------------------------------------------------------- 219
Sbjct 313 TTGTTCCAGACTGACTTTCTGTCTCACAATATCTTCACTATTTCCACAGTTGCAGCCAAGACAGGAAACTGAAA 386
Query 220 -------------------------------------------------------------------------- 219
Sbjct 387 GCTGAGGCCAGAAGGGTGGTGTACTGGGGGGAGGGGAAAATTGAGTGTCACTTTGGAAAACTGGGGCCCCCATC 460
Query 220 -------------------------------------------------------------------------- 219
Sbjct 461 TAAGGATTGCTGCCTCTGTAGATTCAAAAGCAATAAAACAGCAGCTCATTAACTCTTATTTTGTATTTTATTTT 534
Query 220 -------------------------------------------------------------------------- 219
Sbjct 535 CTGTCTTTTTCATGTCTAAATAAAGATTTTTGCTTTGCTGTCCCCAAGTCCCCCTCCTTTAAAGGAGCTGCAGC 608
Query 220 -------------------------------------------------------------------------- 219
Sbjct 609 TCCTTCTCTCCTTGTTCCCAGCTTTCCTTACCCATCTTTGCTTCTAGGGTTGCAGATGGGAGGGACGGGGGATG 682
Query 220 -------------------------------------------------------------------------- 219
Sbjct 683 GACTGCTGAGCTGAAGAGAGGTTTCCAGCCCTCACCTGTGAAAGTCCTGAACATGAATCATTCATTTGGAGATC 756
Query 220 -------------------------------------------------------------------------- 219
Sbjct 757 TGGTGTCTGGGTTGGAGGGGTGGAGTCACATACGGGAATGGGCACTTATTGCCTATTGGTTGTGTATCTACGTG 830
Query 220 -------------------------------------------------------------------------- 219
Sbjct 831 ATGGGCAAGATTAACTGGTAAGATCTTTTTGTCCCACCCACATCCCCAAGACTTGCACACAAACTGTACTTGTG 904
Query 220 -------------------------------------------------------------------------- 219
Sbjct 905 TCTGCATCTTGGACACATTTCCATCTCTTTTTATACTTCTCCACTGCAGTCTTCACATGATGTCTGTGTCATGC 978
Query 220 -------------------------------------------------------------------------- 219
Sbjct 979 CCTCTAGAGAAAGATATGCAAAACCACTTTAACCAGTTTCCCTGCTTCCTCACCTAATTCTTGGGCCTCTGCTG 1052
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1053 ACAAAAATCCCCCCAGGTCTAATTTTCATTTTCTTCTGGAAGAGGCGGCAAGGAGGCTTGAACCACTTTCACAT 1126
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1127 TCCTACCCCTCTCCCCGCCCCAAACCCCTTTGAGAAGACAAAAGAACGGAGCTTTTAAGGGAAGTCATCACTGA 1200
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1201 GACACTCCAGACAGGTAGCCCAGATGATTCCAGCTTCATAATCAATAGAACTGCTCCCCTCAAACGGTCTCCAG 1274
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1275 TACTCATGAACAGGAAGAGAACAGGGTCTGGGATTGGGGTAAAGAAGGGAGTCGTTTTTCTCTCAGTCCCCATT 1348
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1349 TCTTCCCCACCCGTCCGTCTCAGACTCCACCGTTTCCTCTCCACTTTTCCAGAATTGTGTGTATTCTCCTTTAA 1422
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1423 GGGGTTGGGCATCTCTCCCGCCCTCTCCAGAGTCGACTGAAGTTTCCGAGGAGACTTCTCAGGCTGGGCTGGAC 1496
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1497 ACACCTTTCCAAGGACCCCCAAACTCTGCTCCGTGCACGTCAAATGCTCCTTTCCCTTGTGTCCAACCCCCTAC 1570
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1571 CCCTCTCCCTAACACCCCTCTTCTCAACAAGACTCAGCCTCTCCCCGAGGTGGGTGAGCATCCTTGAGGTTTCC 1644
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1645 CACCCTTAACTGCTGTGTCCCCGGATGGAGCCAGAGAAATGTGGTGGGGGGGCCGGGGCCAGAGTTTCAACATT 1718
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1719 GCCCCCCAGAAGGAGGAGCCAGAGATGGGGTCTGTCCAGGAAAATAGGATGCCGGAGCCCAGGAGTCGTCAGCC 1792
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1793 TAGCAGTTGCCTGGCCTCCAGATGCCTCCCAGGGTCACCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACAC 1866
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1867 TCCCTTGAACAGTGAATACGATTTTGCCCTGGTCAACATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAG 1940
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1941 TCCAGCTCCTCCGTCCAGGGTCCCTGCATAAATTTATCCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGG 2014
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2015 CTGCTCAGAGTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAGC 2088
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2089 CAGAGCTCAGAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGAGCAAGGCTGGCCAGGGTTCTGGCTCCA 2162
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2163 GAAAACCACCAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACTGAGCGGAAGAAGCAGGCAGCCAGAGGC 2236
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2237 TGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCTCCCCCGTTACTTCTGGGTCCCTAACCG 2310
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2311 AATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGGGCCGTGGACCGCGCTTGTCCTGGCATC 2384
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2385 ACCCTGGGGGCAGTGATCTTCTCCGCTGTGGAGGCTTCTATACAGCCAGTGACCCTAACAAGGAGGATATCAGA 2458
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2459 GCAGTGGAGTTGATGCTCCAGGCTGGGCATTCAGATGTTGTCCTGGTAGACACTATGGATGAGCTGCCCAGCCT 2532
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2533 TGCAGATGTCCAACTTGCCCACCTGAGGCTGAGGGCCCTCTGCCTGCCTGATTCATCTGTAGCTGAGGATAAAT 2606
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2607 GGCTTTCAGCCCTGGAAGGAACACGATGGCTGGACTATGTCAGGGCTTGTCTTCGAAAGGCCAGTGACATTTCA 2680
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2681 GTATTAGTGACATCCAGGGTTCGTTCTGTAATACTTCAAGCTGCTTTCAGCCCCCGAAGCCCGAACACTGTTTG 2754
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2755 GCTTCCAATCACTAGTACAGCGAGAGTGGGTGGCAGCTGGACATCCCTTCCTGACTCGGCTTGGGGGAACTGGG 2828
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2829 GCCAGTGAAGAGGCTCCGGTGTTTCTCCTCTTCCTTGATTGTGTCTGGCAGCTCCTCCAGCAGTTTCCAGCTGA 2902
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2903 TTTTGAATTCTCTGAGTTTTTCCTTCTTGCTCTTCATGACAGTGTCAGGGTTCCTGACACCCTTACCTTCCTGA 2976
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2977 GAAATACCCCCTGGGAGCGCGGAAAGCAGAGCGGACAGTTAAACTCCTATACACAAGTCTACACCCCAGGATAC 3050
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3051 TCCCAGCCTCCAGCTGGGAACTCTTTTAACCTGCAGCTGTCTGTCTGGGACTGGGATTTACGTTATAGCAATGC 3124
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3125 ACAGATACTACAATTCCAGAATCCTGGCTATGACCCAGAACACTGTCCAGATTCCTGGCTCCCTAGACCACAGC 3198
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3199 CAAGCTTCATGGTTCCTGGACCCCCCAGTTCTGTGTGGCTCTTCTCTAGAGGAGCATTGACCCCCCTGAATCAG 3272
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3273 CTCTGTCCTTGGCGGGACAGTCCTTCCCTGCTGGCAGTCTCTTCTCGTTGGCTCCCTCGACCTGCTATCTCCTC 3346
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3347 TGAAAGCCTGGCTGACCAGGAATGGGGTCTCCCCTCACATTGGGGAGCTTGCCCTTTACCTCCAGGGCTGCTGC 3420
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3421 TGCCTGGGTATCTGGGACCCCAGATCAGGCTCTGGAGACGCTGCTACCTGAGGGGAAGGCCTGAGGTCCAGATG 3494
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3495 GGCCTCTCAGCTCCCACAATCTCTGGCCTCCAGGATGAGCTATCCCATCTTCAGGAGTTATTACGGAAATGGAC 3568
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3569 ACCAAGAATATCTCCTGAGGATCACTCCAAGAAAAGAGATCCACATACCATTCTCAATCCCACTGAAATTGCTG 3642
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3643 GCATTCTCAAAGGCAGGGCAGAGGGGGATCTGGGGTAGAGGAGGGTTCTGTCTAATCTTTTTTTTTTTTTTTTG 3716
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3717 TATCTGCACTTGCAGCCTCAGCTTTCACACTTCAGCCCTTAAGTTCACTAAGAAGGTCTGAGTTTCTGCTGCAG 3790
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3791 ATAGTGGTGTTAACTGCTCCAACTCTTGTCTTGCTTAGTTTCTACAAATATTTTTGCTTCTTGTCATTTGAAGG 3864
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3865 ATTAAGAAACAAAAACAATCCAGAAATTGATCGGTTTTTTTAGGCCAATCCCATCCCTTCTGGATAACCAGATG 3938
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3939 TTAAATCATGAGATCAGAGATGCTGTTCATCAGTCCCAACAAGATGGCCTAGAAATCGCATTCTCACCTCGCCT 4012
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4013 TGCTGCTGCTTTAATTCCAAGTTCTATTTCTTCCCTTATAGTTTTCTATGGGAATGAGGCGGATACAGGAAACA 4086
Query 220 ------------------------------------------------------------------------ 219
Sbjct 4087 CCCTATCTCCTCTGTATTTTTGTAGTGGAATTTCTATTTAAGGGGCTCATTAAAGCATAGTATTTATACACA 4158
