Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_002959375.1
- Aligned Length:
- 2042
- Identities:
- 192
- Gaps:
- 1829
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCCTAGGAAGTCTCAGGAATGGGTAAGTGCTCCTGCTCCCACACAGTCTACAGACCTGGGTGCAATGGTGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGACCTCAGTAAAGCAAAGGAATTACGAAAGGGAGAGGATAGAAGATAAAGTACATAATAGTTTCCTGAAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAGAATGAAAGAACTCTCTGTGGCATGAAAATTTACTGCTAAAGTCAAGCCTTTGGCCTCATCCTATTCTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATCACAGGGAGGCAGCAGCTGAGGCTGTGGTGGGAGAAGAATGACAAGAACTGAGCGTGGGCCACGGGCTCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCTTCAGCAACTTCATCAGCTCTTCCAGCTGGACCATCAGCTCCCGCCTGCTCTCCTGCAGGGCCGACATCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGCTCCAGTTCATCCTTCCTTTGCCTATCCAAGACGAGAAGCCTATCAGATAAAGAGACCCTCAAAGATGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTAAGGCCAGGTGAAATGGATTTCAGACCTGATCCTGCTACTTACCAGTTATGAGACGCTGAGCAAGTCATTTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATCCAATACCTCATAAAATGGTGATAATGTCTGTTTTGCCTACTTCCTGGACTGTTCTGAGAATAATAGGTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGTGCTTTGGAAAGTTTAGATGACTATATAAAGGTATTACTTATATTACCAGAGTGAATTAATGATTAAAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTCTTTAGAAAATCAATGCCTTTTGAAAAATATATAAAATTAGCCCAAATTTAGATTAATAGTAAAGAAACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTAAACTGCTCAGAGAAAACAGGGTCCAGTAGTAAGTACTTTCAGCACTAGACAGATTCAAGAAGGATGACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATCAGGACGGCTCCCTGTGTTCAAGAACAGTCACTTTTCCTTGAGGATAGATTTTATGCCATCTACTCCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAATATGTCCAAAACCAGACTTAAGACTTTATTCCCTAAATGGTTTTCTTGTCTCTGTCTCTTTTTTTTTCCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCTGTCTCTTTTCCCTGTCTCTGCTATTTTTCCTTCCAGGTGTCATGGTTGAAAAACTCAGTCCTCTTTGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACTTTCTTCTTTATATCCTGTATTCAATCAATAACTCAATTCAGATCATTCTTTCTTGGAAAATGTATGTGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATCTTTCTATTCCCATTTCTCTCACTTTATCTAAGCACTCCTTACCTCAAGCATGAAACAGTCTCCTTATGTG 1184
Query 1 ---------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCA 41
|.|||||||||.||||||||||||.||||||||.|||||
Sbjct 1185 ATTAATCCTGCTTTCTTTTTTTTTTTTTTTGTGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGG-- 1256
Query 42 TG--ATCTCGGCTC-ACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCT 112
|| ||||.|.||| |||||||||||.||.||.|.||.|||||.||||||||||||||.||||||..|.|||||
Sbjct 1257 TGCCATCTTGTCTCAACTGCAACCTCCGCTTCCCCAGTTCAAGTGATTCTCCTGCCTCAGCCTCCTAAATAGCT 1330
Query 113 GGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGT 186
||||||||||||| .|||.|||||||||.|.||| ||||||||||||||||||||||||.||||||||||||
Sbjct 1331 GGGATTACAGGCA-TCGCCACCATGCCCAGTTAA---TTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGT 1400
Query 187 TGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------- 219
|||||||||||||||||||||||||||||||||
Sbjct 1401 TGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAG 1474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1475 TCGTGAGCCACCGCACCTGGCTCTTTCATCTTTTATGGTGAGGAAAAAGCAGTGAAATAGAAGTCAATGGCCTC 1548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1549 AAAGTTGAGTATCAGCACCAGTATTTACCAAATATGCAACCTTAGACAAGTCACTTAGCCTCAGTTTTCTCTCT 1622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1623 TCTAAAAGGGGACTAGTAACAGCAACAATATTCTGAGGATCATATAAGGTAATAAATATGAGAGTGTTCTACGA 1696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1697 ACTTTAAACTGCCGCTCAAAACAAAGCTATGTTCATTTCATCATCCCATAATGATCTCAACAGACTTTCTAGCA 1770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1771 TCACTGACCCTTGCCTGTGCAATCGAGACCTACGCTGTCTATCACAGCAGCCGCTAGCCACGCGTGACTACCGA 1844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1845 GCCCCTGAAACAGGGCTAGGCTGAACTGAGATGCACGGCAATTGTAACATACACACTGGAATTCAAAGACTTAG 1918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1919 TGCAGGAAACAGCAAAGTATCTGGATCATGTTTTAATACTGATTACATGTTGAAAGGACAATATTTTGAAAATA 1992
Query 220 -------------------------------------------- 219
Sbjct 1993 TCAGGTTAAGTAAGATATACTATTAAAATTAATGACGCCTATTA 2036
