Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_002959553.1
- Aligned Length:
- 6032
- Identities:
- 191
- Gaps:
- 5816
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGCTCAGGCTCCGACGGTGGCCGGCGGGGGTCACGAGGCTTCGTAGTGGAGGAACGGGTTTGGCGTGTGGGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGCTGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCTCCAGGGACATGGCGGCGGCCTCTGCGGTGTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCTGCTGGTGGCGGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGACATGGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGAAGAAACATTACCAAGGTCCTCATTGCAAACAGAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAATTGCCTGCAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACAGACTGTGGCGGTTTATAGTGAGGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAGAAATTCCATGCATGTAGATATGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCAGAGCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTTTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAGAGACATGGGTATAAAGAGCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATCCTGTCATGATTAAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTCCGGGGTGGAGGAGGAAAAGGAATGAGGATTGTTAGATCAGAACAAGAATTTCAAGAACAGTTAGAGTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAATCTGAAGTAAGAAAAAAGCTGGGAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCAGTCAGAGCTGCTAAAGCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTTATTATGGACTCAAAACAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATTTCTGTTTCATGGAGATGAATACAAGGCTGCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGGTGGAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACAGCCTTCGTCAGTACAATATTGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAACAGTTGTTGCTCAGTCGGAAGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCTTCAGGCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATCTCGTATACCAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AACATGACTCTTAAAGATGGTAAAAACAGTAAGTAATGTTTCATTAAAAGAGAAATGTGAGTCATAGAAATGTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACATTAATCTGAAAAAGAGGATTCCAGCCTGGCCATGATCAGTCAGTTACATTTTTTAAATGCCTAGGCTAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACATTGGAGGGAAATATGCCAATATAATAGAATTGATTGGCTCTGGGTAGTAGAGTTGATGGTATTTGCTTTTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCTTTACACTTTTTAAAAATTTTGTAAATATTCTAAAAATATGTCATAAAATAAACATAGCAAAACAGCTGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATGAAATATGCCAGAATGTTAGAAATATGCCCAAAAAAACCTCTTTTTCCCCAATTCTTTGTACTTTTTTTTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCTTTGCAATTTTTCTGCAGCGAGAATGTATTACTTTTAAATAAGAAAAACAGTTTTCAAAACTATGTCAGAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGACGATTACCCACTGCCCATGCAGTGTTTCAGGGGTTTCAGGTGGAAGTGGGTCACTGCAGAGCTGTAATTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTAAGTGCCTTATCTGATGTAAGTTTTTATCTTCACAACGTAAATGAGGGGGAGTCGCTGTTATACCCACGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGAAGATGAAAGCATGGATGGTAAGGCACAGAAGTGAAGTAGTTTAGTCAAGGCTAGTGAGTGGCAGAACTAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATTCACACCTACTCTTTGTGACATTGACTCTTAGGCTGTTTCCACCACTTTTCCAGTAGAAAATTGATTTTTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTGTAAACTAATTTGAGTTGGCTCGACTTAGTGACTGATTTTCTTTAACTGATGTCAAAAGAGGCTGACGCTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGCCAGAAGGCAGTTTATAAACTTTTGGCTGGAGCAGTGTAGCAGCAGGACCAGAATTCTATGATAGCTGGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACTGTATCCCTTCTGCTGTGAGACAGTTTGTGTGGGAGGCCCAATGGGCAGAGTCAGAGCTCAGAATCCTGGCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AACCTTGAATGTGACATGTCATTGAACTGTGACAGTTCTGGTATAAAAATATGCCTCCCAGGTAGAGCAGAATA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTTCACCAGCTGATCACAGAACGCTCTTCCTTGGACAGAGGAAAATCTCTTTTACTTCACCTCTATGAAGACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTCACCCAGTAACAAATTTTTTTTTTTTTTTTTTTGACACAGACTCTGGCTCTGTTGCCCAGGCTGGAGTGCAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGGCACGATCTTGGCTCACTGCAAGCTCCACCTCCTGGGTTCGTGCCATTCTCATGCCTCAGCCTCCCGAGTAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGAGACTACAGGCACCCACCACCACGCCCGGCTAAGTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TAGCCAGGATAGTCTCGATCTCCTGACCTTATGATCCACTCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTGAGCCACCATGCCAGCCAGTAACAAATATTTTGTTCACACAAGTTTATTGGGTTACAGCTCTTCAGTTATTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTCAATCCTGAGCCTAGATGGTCATTATCTTAAGTGCATTGGGCATATTGTTAAGCCTTTATAATGAAAATTTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TAAACATCTTTATATAGTAGCATTCTGCAAATGGTTAACCCATCCATTTATGCTCATTTCATCCTAAAAAATAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AACCCCCCAAATCTGGAAGTATCTTATTCTAGACTCCTATATGCTGAATGCAAATATCAAAAGCGGTAAAGTTT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CACTGGCTTCTTCAACCTGAATTGAACAGAAGAATTACATATTTGATTGTAATTCATATAGGCCAACTGTGTTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTGGCATGGCTCTTCACTAAAGCACCAAGCACTGATTTGAAGTATGTTGCATTTTTTGGAATTAAAAAAAGTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TTCATGAAAAAATAAATACATAATTGAAAAGCCAACATGATTGCTGTTCACTACACCCTTTTGGCAGTATTCTA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGAAAATAATCCAAGTCTGTATGTAAGAGCTTTCAGAAAATGATACATAGCTAAGTCTCCAAAAAATGCTAATA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGCAATGACCACAATTAAATAGAATGCATGAAACAGGAAGCTTAAGAGACCAGGCTGGTCACAGTGGCTCACAC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTGTAATCTCAGCACTTTGGGAGGCCAAGGCGGGAGGATTGCTTGAGGGCAGGAGTTTGAGATCAGCCTAGGTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ACATAGTGAGATCCTGTCCCTATTTATAAAATAAAAATTTTTAAAAAGGAAAAAAAAAAAAAAAGATACCAGAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GTGCCAGGCACGGTATCTCCCACCCGTAACCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AGATGGAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCTCCTAAAAAGTACAAAAAATTAGCCAGGCATGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGTGGAGCTT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGGCGACAGAGCGGGACCCTGTCCCAAAAAAAAAAAAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAAAAAAAAAAGGTGCCAGAAGCATTTATGAGTCCAAAGCAGAAGCAACTTCTAGTGACCACAGTGAGAATGAC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CAACTATTTTAAGTATTCAAGGCTTGCAAGCTATTCTTACTTTGCTACTAGAGGCCACGTTTCACAGAACCCTG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CCTAAACTCAATGATAATAGCTAAGATTTATTGAGTTTTTGGTTTATGTCAGATACTGTATTAAACACTTTCCA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AAGATTGTTTCATTTGCATTTTCAGAAAAGGCCAATGAGATTAGTGTTATTATTAGTAATTTTCCAAAAGTCAC 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 ACCAGAAGTTATTGGTGGAGTCAGGGTTTGAACCCACACTCCAGGATACACGTGCTGACCTAATACTGCAGGTG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CCACACTTGATACCTTCTTAAATGCATGAGAGGATGTTTAAGGTCCTCTTATATGTGACAAGAGATATCTAGGG 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TAGGAGTTTTTTTGGTAGTGTCTTTACTGTGATCTGTTGGCATTCGCGCCAGTTAAATACATGTCGTATTTTAT 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AAATTCAAAGAAAATGGCCGTGGTGTAACTGGAGGCACTTTCTGATAAGAAGAGTAAAAGCCTGTTGACATGAT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 ATAGGGTGGAGAGTTTTATTCATTCATACATTCAATACAAAGTTTTTGATAAAATAGATATGCCAAGTGATGTG 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GAGAAGAGAAGGAAATGTCTTTGTCCCTGCTTTTTTTCTGTTAAGGAATTTGCCATTTGGAAGTGTGTATGTTG 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 AGAAGCTGGAGAGCATGATGGTCAAGAGTGCGGGCCCTGGAGTTCCTGTACTTTAGTATTTGACTTTTGTGAAC 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 ATTTTTATTTTGATAATTTTTCTGAAACAACTGATAGAGAGGAAAATCACTCTTTGTAAACCAGGATGAGGAGA 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 GAATCATAGTGGGTGTTTTGTATGCAGAAGGCTAAATGTTCAGAGGAGGGAGAAATTAAGCTGCCCAGGCCAAC 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 TCTTCCCAAGGACAGTGAGGCTGATGTGAATGGGCAATGGGGTTTCTGTGCTGTGGCAGGGCACCAGCAGCGTA 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 GTGAAGGAGAAGCGTGAGCACAGAGCCACAGTGCAGGGAAAGCTGGGGGCATATATGGGGAATTTTTTTTGTGT 5402
Query 1 ----------------------------ATGGAG--TCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA 44
|.|||| |||||||||||.||||||.|.||||||..||||.||||
Sbjct 5403 GTATTGGTTTTTTGTGTTTTGTTTTGAGACGGAGTCTCTCATTCTGTTGCCCAGGCAGGAGTGCCGTGGTATGA 5476
Query 45 TCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATT 118
|||||||||||||||||.||||||||.||.|.||||||||||||||||||||.||||||..|||||||||||.|
Sbjct 5477 TCTCGGCTCACTGCAACTTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACT 5550
Query 119 ACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 192
|||||.....||.|||||||||.||||| |||||||.|||||||||||||||||||||||||||||||||||
Sbjct 5551 ACAGGTGTGTGCCACCATGCCCAGCTAA---TTTTTGTGTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 5621
Query 193 GGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------- 219
|||||||||||||.|||||||||||.|
Sbjct 5622 GGCTGGTCTCGAATTCCTGACCTCAGGCTATCCGCCCACCTCGGCCTCCCAAAGTACTGGGATTACAGGTGTGA 5695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5696 GCCACCTCCCCAGGCCTAGAGAATGTTAATTGTCCCACTTTCCTATTTGGGTGGAGCATCAGGCCGTCCATGGA 5769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5770 GGAGAATGGTAGGAAATAAGACTGAGAGGGTGGGGCCTCCAATATCAGGCCAAGTATTTGGAATGGGGTCGGAA 5843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5844 CATCAGCTCTGACTATTGAGATGAGAAGCAGGAAGACCCCAGAGGACCTCCTCAGATTCAGCCAGGCCTGAGGC 5917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5918 AGTGGGGCCTGAGGCAGGGTAGAGCAGTAGGAATGGAAGGAAGAGATGCATAGGATAGGGAAGAATTTGGCAGC 5991
Query 220 -------------------------------------- 219
Sbjct 5992 TTTGTAGTAACTGTCCCTATTTATAAAATAAAAATTTT 6029
