Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_002959592.1
Aligned Length:
2098
Identities:
188
Gaps:
1885

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCTGGGCGAGGAAAGCGCGGCCCTTTCCGAGTTTGGTGTTTTGCAGCGAAAGGAAATCTCGCTCTTCCGAAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCTCCAGGGCGAGAGAGGAAAGGGCCTAGAATACCTCCTCTGAAAAATGGCAGAAGCAGTTTTCCATGCCCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCTATCATCACATCAAAGAGGGGCCATTCTAAGTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TATGTGCTGCCGCATCGAGCACTGTTCAGTCTTCTTAACCAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGATGCGTAGACAGGGGCAGGATGAGAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCTCCTGTGAAAAGGAATGAAGAGGCTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACAGCAGGGGGAGAGAGACCTTCTGTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCCATTAGGCTGCCTGCAGGAGGGCTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GATGCCTCACCTCTGCCCCATGTCTGTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGACGGCAGCCAGCACATCGGCCTCCTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAGCGGAGTGTGCCATGAGCGAGAGGGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGAAGAAATCCATATAGGATCTTTGAGTATTTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGATGTTTAAGTATTTACTATGAGAAGGAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGCCCACGTTCAGAACCACCTACATGGCCTACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGTACGGGACAGATTTACTGCTATATCGGAAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCTAGTTGATGACCATTTTGAAGGCTCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTCCGTTAATGTCTCTAAGGAACTTATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAGTCACCAGAATGTATGAAAAGGATTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAG  1554

Query    1  ------------------------------------------------------------------ATGG--AG  6
                                                                              |.||  ||
Sbjct 1555  GAGTGACCAAGACGATCTTTAACAATTCAACCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAG  1628

Query    7  TCTCATTCTGTCGCCCAGACTGGAGTGAAGTG--GCATGATCTCGGCTCACTGCAACCTCTGCCT-CTCGAGGT  77
            ||||..|||||||.||||.|||||||..|.||  ||  |||||.||.|||||||||||||||||| || |.|.|
Sbjct 1629  TCTCGCTCTGTCGTCCAGGCTGGAGTCCAATGCTGC--GATCTTGGATCACTGCAACCTCTGCCTGCT-GGGTT  1699

Query   78  CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTT  151
            .|||||||||||.||||||.||||||.||||||||||||||||||||||.|.|.||||..|.|||||||   ||
Sbjct 1700  TAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCACCACACACGGCTAA---TT  1770

Query  152  TTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------  219
            |||||||||||||||||||.||||||||||.|||||||||||||||||||.|||||||||||||||||      
Sbjct 1771  TTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCT  1844

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1845  GCCCGCCTTGGCCTCCCAAAGTGCTGAGAGTACAGGCGTGAGCCACTGCATCCAGCTCTTAGCATGTGCTTTTA  1918

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1919  AAGTAAAAACCACGAGGAGAAGGTACTCATTACTTCATAACTTGTGTCTCACCCACCTTGCTGTCTTCACATCC  1992

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1993  CCACTTTCTGTATGCACATTGGAAGGTGAATTTGTTCAGCTCACATTAATTTATAGGAATAATTTTCATTGCTC  2066

Query  220  --------------------------  219
                                      
Sbjct 2067  TGTGAATAAAATGTGCTACCACTTTA  2092

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