Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_002959736.1
Aligned Length:
4679
Identities:
174
Gaps:
4479

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATAAGGCCTGGCGTTATTGCTTAGAGGCGGCTACCTGGAGCCGGAAGCGCGGCTGCAGCAGGGCGAGGCTCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTGGGGTCGGTTCCGCATCCAGCCTAGCGTGTCCACGATGCGGCTGGGCTCCGGGACTTTCGCTACCTGTTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTAGCGATCGAGGTGCTAGGGATCGCGGTCTTCCTTCGGGGATTCTTCCCGGCTCCCGTTCGTTCCTCTGCCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCGGAACACGGAGCGGAGCCCCCAGCGCCCGAACCCTCGGCTGGAGCCAGTTCTAACTGGACCACGCTGCCAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACCTCTCTTCAGTAAAGTTGTTATTGTTCTGATAGATGCCTTGAGAGATGATTTTGTGTTTGGGTCAAAGGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGAAATTTATGCCCTACACAACTTACCTTGTGGAAAAAGGAGCATCTCACAGTTTTGTGGCTGAAGCAAAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCTACAGTTACTATGCCTCGAATCAAGGCATTGATGACGGGGAGCCTTCCTGGCTTTGTCGACGTCATCAGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTCAATTCTCCTGCACTGCTGGAAGACAGTGTGATAAGACAAGCAAAAGCAGCTGGAAAAAGAATAGTCTTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TATGGAGATGAAACCTGGGTTAAATTATTCCCAAAGCATTTTGTGGAATATGATGGAACAACCTCATTTTTCGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCAGATTACACAGAGGTGGATAATAATGTCACGAGGCATTTGGATAAAGTATTAAAAAGAGGAGATTGGGACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATTAATCCTCCACTACCTGGGGCTGGACCACATTGGCCACATTTCAGGGCCCAACAGCCCCCTGATTGGGCAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGCTGAGCGAGATGGACAGCGTGCTGATGAAGATCCACACCTCACTGCAGTCGAAGGAGAGAGAGACGCCTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCCAATTTGCTGGTTCTTTGTGGTGACCATGGCATGTCTGAAACAGGAAGTCACGGGGCCTCCTCCACCGAGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGGTGAATACACCTCTGATTTTAATCAGTTCTGCGTTTGAAAGGAAACCCGGTGATATCCGACATCCAAAGCAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTCCAACAGACGGATGTGGCTGCGACACTGGCGATAGCACTTGGCTTACCGATTCCAAAAGACAGTGTAGGGAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTCCTATTCCCAGTTGTGGAAGGAAGACCAATGAGAGAGCAGTTGAGATTTTTACATTTGAATACAGTGCAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTAGTAAACTGTTGCAAGAGAATGTGCCGTCATATGAAAAAGATCCTGGGTTTGAGCAGTTTAAAATGTCAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGATTGCATGGGAACTGGATCAGACTGTACTTGGAGGAAAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGTTCTCAGGCAGTACCTGGATGCTCTGAAGACGCTGAGCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCTATTCGATGATGGTGGGGACTGTCGTGGTTTTGGAGGTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGCGCAGAAAGGCTGAGCTGGAAGTCCCACTGTCATCTCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGTTCTTTCGGCCGTTCACGTCATTGTGTGCACCTCAGCTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGCGGCAGGTGGGGTGATGGTGCTGGCCTCGGCGCTGCTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTGGGTGGAAACACCCCAAGGAAGAACCCCATGCATCCCAGCTCAAGGTGGTCAGAGCTAGACCTTCTTATTCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTTGGGGACGGCGGGCCACGTCTTGAGCCTGGGCGCCAGCAGCTTCGTGGAGGAGGAGCACCAGACCTGGTACT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TCCTTGTGAACACCCTGTGTCTAGCTCTGAGCCAAGAAACCTACAGAAACTACTTTCTGGGAGATGACGGTGAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCTCCGTGTGGCCTCTGTGTGGAACAAGGGCATGACGGGGCCACAGCAGCGTGGCAGGACGGGCCTGGCTGTGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTCCTGGAGCGAGACAAAGGCCACGGAAGCCCCTCTACCTCCGAAGTGCTCAGAGGCCGCGAGAAGTGGATGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGCTGGCCAGTCCGTGGCTAATACTGGCCTGCTGCCGGCTGCTGCGCTCCCTAAACCAGACAGGTGTGCAGTGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCTCACCGGCCTGACCTCGGCCACTGGCTCACCAGGTGAGAGCGTAGGCCCGTGGCCACAGGCCAGACTTTCTA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CGGCCGATTGGTCACCTGCCAAGCTCTTCTTTTTCTAAATTGAGACCATTTTTCATATTAAGAATGGGATAGTA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTTGAGATCTGAAGAATTGGGAAAATACACTAAAACCAGTGTTTTACTGGATACTAGAATCAATGTTGAGAAGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAATTTATTTGGGGGCTAGCCTAACAGGTTTCATTTATTAGTGCTGAACCACTGTAACTGTTCATGATTGAAAA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CTTGTGTTTCAGTGATCATTATATAGTAAAGATGCTATGTGGGGGTCAAGCTTGCTAGTGGCTTGTTCTGGACG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTCGTCCATGCCTGGGCTGTGTGCCCCCCGCCCATCACTCAGTGTCTGCCTGTGTCAGGCCATTCGTGTGTTG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTATAAAGAAACACCTGAGGCCGGGTCACATGTAAGGAAAGAGGTTCATCTTGGCTCTCAGCTCTGCGGGCTGC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACAGGAGGCATGGTGTCGGCATCTGCTCCTGGAGAGGCCTCAGGAAACTGGCGGTCATGGCGAGGGCAAAGCAG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GAGCCAGCACTTCACGTGGCGAGAGCAGGAGAAAGAGAGGGATGAGGAGGGTGTCCGGCACTTTTAAACATCAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CTCTCTTGTGAACAGCCACAGCGAGAATGCGCTCATTACTGCGAAGATGGCACCAAGCCATTCGTGAGGAATCT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCCCCCATGACCCAGACGTCTCCCACAAGGCTCACTTCCAACACTGGAGGTTCAGTGTCTTTTTTTTTTTTCTG  2960

Query    1  --ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC  72
              |.|||||.|||.||||||.||||..||||||||.|||||||.|||||.||||.|||||||            
Sbjct 2961  AAACGGAGTTTCACTCTGTCACCCATGCTGGAGTGCAGTGGCACGATCTTGGCTTACTGCAA------------  3022

Query   73  GAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA  146
                |||||.||||||||||.|||.|||.||.||||||||||||||||||||.|.|||.||||||||.||||||
Sbjct 3023  ----TCAAGAGATTCTCCTGTCTCAGCCCCCTGAGTAGCTGGGATTACAGGCGCCCGCTACCATGCCTGGCTAA  3092

Query  147  TTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-  219
               |||||||.||||||||.||||||||||.|||||||||||||..||||||.||.||||||||||||||||| 
Sbjct 3093  ---TTTTTGTGTTTTTAGTGGAGATGGGGTGTCACCATGTTGGCTGGGCTGGCCTTGAACTCCTGACCTCAAGT  3163

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3164  GATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCAGCCTGAAGGTCCAAG  3237

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3238  TTCAATATGAGATTTGCAGTGGACAAACATCTAAGCCATGTCATTCCCCCAGACCCCTATCCTGCTGCTGATGA  3311

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3312  TCCCCAGGGCAGCAAGAAGGACGGGGTCAGCCAGGCAAGGCAGGCGCAGCCTCTGTGGGCCAGCTTTGCCCTTA  3385

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3386  GCAAAGCTCCTTTCTCCTCCCCATCCTCCCTTTTCTCTCTCCTCATCCTGAAGGGACAGAGCCGTGTGGGGGAA  3459

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3460  TTCAGCCACCTCCTGAGCCTTTCATTGGCGACTGGAAAACCACCTAGAAAGTATAGCAAATCATTTCAAGCAAG  3533

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3534  GCTCGAAATAAGTAGAAGAAACCAGGACAGAAAAATAACTAAGATTTGCCGAGACTTAAATTTTAATTGTCTGG  3607

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3608  CAGTGAAGACTTAGGAAACTAAAGCAAAAGAAGCAGCACAATGAGAGCATCTGCGGCGAGAGTAACAGCAAGGG  3681

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3682  TTGCGGTCCCGTCACTGCAGAGAACTCCTGTAAGAAATGGCAGCAGAAGGAAAAGGGAAATGCCTAGTCCTAGT  3755

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3756  AATGAGGGCACTTCCAGTTAAATGACAGGGTGTGACTTCATACCTGCTGAGGCAGAGAAGCAGAATTGAATGAC  3829

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3830  GAGACTCAGTCTTGGTGAGCACGTGAGGATTCCTGGGGCCACGTTAGTGGCACAGTTCTTTTGGAAGATACTTG  3903

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3904  TAAGTTTACATCAGAAGCTGCGAAATTACAGATTCTTCTGATTAAGTAATTCTTGTGGGAGGCTAAGCATTAAC  3977

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3978  TAAATTACGAAAACCTCGGTTAGCCAAGTCATCGCAGATGGGTCCTTCTATCTGCCTGCTGTGTGCCTGCACGT  4051

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4052  TTCCTTTCCAGAGAAGCCCCGGAGAGGGGACTTTGGTTGGTCCCCACTCCAGAGCTCTGACCACAAAGCCGAGC  4125

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4126  TCTCTGTCCTGGCTGCCCTCTCCCTCCTCGTAGTTTTTGTGCTGGTGCAGAGGGGGTGCTCCCCTGTGTCCAAG  4199

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4200  GCTGCCCTGGCGCTGGGGCTGCTGGGCGTCTACTGCTACCGGGCGGCCATCGGGAGTGTCCGGTTCCCGTGGCG  4273

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4274  GCCGGACAGCAAGGACATTTCCAAGGCAACTCCAACAACATTGCCACCGTGGACATCTCCGCAGGCTTCGTGGG  4347

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4348  CTTAGACACCTACGTGGAAATCCCAGCCGTGCTCCTGACAGCGTTTGGGACGTACGCAGGGCCTGTGCTGTGGG  4421

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4422  CCAGCCACTTAGTGCACTTCCTGAGCTCAGAAACACGCAGTGGTTCAGCACTGAGTCATGCTTGCTTCTGCTAC  4495

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4496  GCACTGATTTGTTCTATTCCAGTTTTCACGTACATCGTTTTGGTGACATCTCTGCGTTATCATTTATTTATATG  4569

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4570  GAGTGTATTTTCTCCAAAACTTCTCTACGAGGGAATGCACCTGCTCATTACAGCTGCTGTCTGTGTATTCTTCA  4643

Query  220  -----------------  219
                             
Sbjct 4644  CGGCAATGGATCAAACC  4660

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