Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_931812.3
Aligned Length:
4029
Identities:
188
Gaps:
3814

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TAGGCTGGAGTAGAGTGGTGTGATCTTGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTCCTGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGCCTCCCTAGTAGCTGAGATTACAGATGTGTGCCACCACGCCTGGCTAATTTTTGTATGTTTAGTAGAAACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCCAACCTCAAGCGATCTGCCTGCCTTAGCCTCCCAAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCTGGGATTACAGGTGTGAGCCACTGCACCTGGCGGAAGTTCTTAACTTTAATGTAATCCAGTTTATCAGAAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTCCTTCATGGTTAGTCTCTTTTGGAGTTGTTGTTGTTGTGTTTTTTTAAATTTAATTTATTTATTTATTTAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTATTTATTTGAGACAGTGTCTCATTTTGTTGCCCAGGCTGGAGTGCAACCTGGGCTCACAGCTCACTCATCTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACTGCAGCCTCATCCTCCCAGGCTTAAGCAATCCTCCTACTTCAGCCTCCCGAGTAGCTGGGGCTGTAGGTGTA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGCCACCATACCTGGCTAGTTTTGTATTTTTTGTAGAGATAGGGGTCTTGCTTTGTTGCCCATGCTCATCTCAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCCTGGCCTCAACTGATCCTCCTGCCTGGGCCTCTCAAAGTGCTGGGATTATAGGCATGAGCCAACGTGCCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGCCCGTTAGCCCTTTTGTAACTTAAGAAATGTTTTGACTATTACAAGGCCATGAATATAGTCTTTCATTTTTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTTTGAGTTTTATTATTTTACCTTTTACATTTAAATCTACAGTCCACCTGGAATTGATTTTTAGGTATGACAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAGGTAGAGGTCAATATTGTTTTTGTTTTTTTTTTTCCCCAGATGGATATCAAATTAATCCAGAACAATTTATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TAAAAGACTTTCCCTTTCCAGCTACTCTACAGAGCCAATTTTGTCATAAGTCAAAGATTCATGTGTGGATATGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTCTGGACTTTCTTTTTTGTCCTGTTGGTCTCTTTGTAAGTCTTTAAGTCACTCTCTTCATTCTCATAACTTGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGTCTTGCTATCTGATAGTGAAAGTCTTCCACTGTGTTGCTTCTCCAAGAGTCTCTTGGCTTTTCCTGGTCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGCATTTCATTTAATTTTAGAATTAGCTTGCCAATTTCTACCAAAAAAAAAAGTGATGGAATTTTGATACATG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGATGAATAAATTAATTGGAGGAGAACTGCTATCTTTACAAGATTCAGTTTTACAATCCTTGAACGTGGTATGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCTCCATTTAACCAAATGTTTTATAGTTTTCCGTGTAGCGGTCTCATACATCTTGTGTTAGATTTAGTCCTAG  1332

Query    1  ----------------------------------------------------------------ATGGAGTCTC  10
                                                                            |..|.||.||
Sbjct 1333  AGAACTATACTAATATAAATGGTAACTTTTTAAATTTTCCTTTTTTTTTTTTTTTTTTTTTGAGACAGCGTTTC  1406

Query   11  ATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAG-GTCAAGC  82
            .||| |||.||||||.||||||||.|.|.|..||||||.|||||||||||||||||||||| |.|| .||||||
Sbjct 1407  CTTCTTGTTGCCCAGGCTGGAGTGCAATTGTGTGATCTTGGCTCACTGCAACCTCTGCCTC-CCAGATTCAAGC  1479

Query   83  GATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGT  156
            ||||||||||||||.|.||||..|||||||||||||.|||||||.|.|.|||||||||.|||||   |||||||
Sbjct 1480  GATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTTCAGGCACCCACCACCATGCCCAGCTAA---TTTTTGT  1550

Query  157  ATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------  219
            ||||||||||||||.||||||||||||||||||||||.||||||||.||||||||||||||||           
Sbjct 1551  ATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGACTGGTCTCCAACTCCTGACCTCAAGATAATCCTCCC  1624

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1625  ACCTCGACTTCCCCAAGTGCTGGGATTTGGGATTACAGGTGTGAGCCACTGCACCTGGCCTAAAATGTTCCATT  1698

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1699  TCTAATAAAATTTTTAGAAGAGTCCATTTACATGATTTACTATTTATATAGAGAGATGTAATTCCTTTTTTTTT  1772

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1773  TCCTTTTTCTTTCTTCTTTTTTTTTTTGAGACAGCATCTTGCTCCGTTGTCAGGCTGGAGTGCAGCAGCATGAT  1846

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1847  CTCGGCCACTGTGTGATGTGTTAGAGATACTCTTTATTAGTTAAGAAAATTCCCTTCTCTTCCTAAGTTGCTGA  1920

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1921  AAGGGTATGGGTATTGATTTTGTCATGTTTTTTTCTGCATCTATGAAGCTATATAATTATATAATTTTTCATCT  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  TTATTGATATTTATCTTTATTCCCATTTATTGATTTGGGGATGTTAAGTCAATCTGTCTTTCCTGAAATAAACT  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  TAACTTGACAGTGTTATATTATTCTACCCATAATTATTTTTAAGATTTTTTTTGCATCTGTGTTCATGAGAGAT  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  TGGTTTCTAATTTTCTTATCAAGTTTGGTATCAAGGTTATGCTAAAAATCAGCTGGGTGCAGTGGCTCACGCCT  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  GTAATCCCAGCATTTTGGGAGGCTGAGGTGGCCGGATCACCTAAGGCCGGGAGTTTGAGACCAGCCTGGCCAAC  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  GTGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACAAGCCTGTAATTCCAGCTA  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  CTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCCAGGAGCTGGAGGTTGCAGTGAGGCAAGATCAGGCTACTG  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  CACTCCAGCCTGGGTGACAGAGCGAGACTTCGTCCCAGAAAAAAAAAAAAAAAAAAAGGTTATGCTAAAATCAA  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  AATGAGTTAGAAAGTATTTCTTATTTTCTTCTTCCCTGGAAGAGTTTATGTAAATTAATGCTGTTTGTTTCTTA  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  AACATTTGGGTGACAATTATTTTGATGAAATGCATGAGAACTAGTTTTGTGGACCATGTTTTGGAAAACAGTGG  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  TCTAGAGCATGACTGAAATATGAAATAGTGAATTTCTGTCCGTGTGAATGCTCTTGTTTTTATTCATTTCCTTC  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  CTTTATGCAGCACTGGCCCCCTCACCTTTTCCTTTCCAGCTGTTTGGGGCTCAGCTAAGTGACCACACAGGAGA  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  GCAGTGAGGCCATTTGAGGCCTGAGCCTGGTCCTCAGGACTCGACTCTCTCTCCCTGCCATCAAGCAGCCTGCC  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  CCAGCCCTGCCAGCCATCTCCACACTCCTGACAGAATGAATGCCCTCGATGGTGTTCCTTTCAAGTTGCCCAAG  2956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2957  GGCTTTGTGATAGGCACAGAGCCTCTCCCTGGGCCAGAACTCAGCGTCCCGGCCTGCGGGGAAGTTCTGCTGGG  3030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3031  TTCTATGCACGACTTCAGCCTGGAGAGGACGGCACTCTTCTGGGTGGAGGCCGCCGGCCAGGGACCCAGCCCGT  3104

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3105  ACCAGTGCGGTGACCCGGGGACAGCGTCAGCCCCTCCAGCCTGGCTCTTGCTAGTCAGCCCCGAACATGGGCTG  3178

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3179  GCGCCTGCGCCCACCACAATCAGAGACCCGGAGGCCGGACACCAGGAGAGGCCGGAGGAGGAGGGTGAGGACGA  3252

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3253  GGCAGAAGCCTCCTCTGGCAGCGAGGAAGAGCCGGCCCCCAGCAGCCTCCAACCGGGCTCCCCGGCGAGCCCCG  3326

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3327  GCCCCGGCCGTCGCCTGTGCTCGCTGGACGTGCTACGCGGCGTGCGGTTGGAGCTGGCAGGGGCGCGGCGGCGG  3400

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3401  CTCTCCGAGGGGAAGCTGGTCTCCCGGCCCCGCGCCCTCCTGCATGGCCTCCGCGGCCACCGCGCGCTGAGCCT  3474

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3475  GTGCCCGAGCCCTGCGCAGTCCCCCAGGTCTGCATCACCCCCGGGGCCCGCGCCCCAGCACCCCGCCGCCCCCG  3548

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3549  CGTCGCCCCCGCGGCCCTCCACGGCAGGCGCCATCCCCCCGCTGCGGAGCCACAAGCCTACGGTCGCGTCCCTC  3622

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3623  AGCCCGTACACCTGTCTGCCACCTCTTGGGGGGGCACCCCAACCTCTCAACCCCCACAAGTCACACCCTGATAC  3696

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3697  TGCGGCTGACCTGCTGTCCGCCCTGAGCCAGGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCCTGGGATATC  3770

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3771  CCCTGCGAAGGGCCATCATAGCTCTGCAGAAGACAGGGAGGCAGAGCCTGAGCCAGAGTTCACTCTATTGGAAG  3844

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3845  TATGGCGGAGACTCATGATGACACTCCAAGGACAGCACTCTGAGCCACGCTACTATTTGGAAGCAGGTCTTGAC  3918

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3919  CCCTGATACAAGCCAAGAATTTTCTCAGCTACCTCAGTGCCTGTGACCGCCTGTTACGTCAGGGATATGAGGAA  3992

Query  220  ---------------------------------  219
                                             
Sbjct 3993  GGCCTGGTGGATGAGGCCATGGAGATGTTCCAG  4025

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