Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_942832.2
- Aligned Length:
- 3668
- Identities:
- 185
- Gaps:
- 3457
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTATTATCTTCAGAGATTAAGGCAGTATTTTCTGAGCAGATTTAACAAAAATGATCTTGCCTAATTAAAAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCACTGGGTAGTGTTCGTCAGAGAGCCCGGCTGCTGGCTGTTATTTCCTGTGTCAAACTTCCTCTTACCCCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGTTTGTACATGAGACAGTTAGAGGGGCCGTGTCTCAGCTCTGCCACCCACGTCTCAGCCCACTCGCACTCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGGACAGAATGTTAAAGAAAACTCAGAACATAAATCTGGGTGGGGAGAGCTAAGAACTCTACATTATGTTCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTCGTTTCTTTTTTTATAGCTCATCATAACCTATGCCTATTTTTCCCTTTGAATCTTTCATAGATTCCAGTCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAGGCCAGATTCAAGACTCAACCCCAATTATTGGGTATAAGAGACACAATAGGTATTCAATAAACATCGGTTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTGAATTAAATGGGATTGAAATTGGCCCCACTAAGACATAGATCTCTTAGGGGTTGTTTGGCTGCAAAAACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAATCTAGATGACTAGCTAAAGCTAAACAAGAAAATTTACTGTAAGGATACATGGATTTCTTTATGAGAAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAAAAGGAAGTGGAAACTTACCAGGAATGAAAGAGAATGCTGTTTATAATTTTTAGGGAGCATTGAGGTCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCTGCCTCACTATCCTTCCACCTTTGGCTCTGCTTGCAGTGGCTCTGGTTCTATCCATGCTTTTACTAAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCAAATTCTGTAAAGCAGGAAACTACAAAAACGTTACAAAAGGCTCTGTCAAAAGATTCTTCAAGTGATTAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATAGCACACTCTGCATAGGAAATGAAGCCCTCGGAGAGATTTGAAGAAGCCCTTGGAGAGATTTGAGATATCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTAACGGAGAAAGAATTGACCTTCATTATCTCAGGAAGGCTTTTGACATAAAAGAGAAAGAGAAGAAACTGATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTTAAAGAGGAGAGAGAGCTGTAAAGAGAACTACGAGGATGAGCATCAGGCTTAAAGTGGCTTAATTTATAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGATAATTTAAAAATAGAATTGGAACATTAAGCCTTAATATGACCTATACTCCTCGCAATCCAGAAGTGAAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAAATGTGGACATGAGAGGGGCACAGAGGAAGACTACCTGAAGACACACAGAGAGAAGGTGACCACGTGGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGTGGAGCATCTACAAACCAACACACATACCAAGGATTGCTGGCAAGTATCACCAGAAGCTAGAAGAGGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAAGGATTCTCCCCAAAGCTGTCAGCAAAAACACAGCACTGATGGTACCTTGATTTCAGACTTTTAGCCCCGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACTGTGAGAGAGTAAATTTCTGTTGTTTTAGGTGACCTGTTTTTTGGAATTTGTTATGTCAACTGTAGGAAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGATATTGTACAACGATTGGGGCATGACTTTGCAATGGTTTACCTGCTCTCAGATGAAAATTTTTTTTTTTTGT 1480
Query 1 -----------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAAC 61
|||||||||...|||||.||||||.|..|||||.||||| || ||||.|||||||||||||
Sbjct 1481 TTTTTTTTTAGATGGAGTCTTGCTCTGTTGCCCAGGCCAGAGTGTAGTGG--TGCCATCTTGGCTCACTGCAAC 1552
Query 62 CTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCA 135
||||.||||.||.|.||||||||||||||||||||.||||||.||||||||||||..|||| |||.|.||||
Sbjct 1553 CTCTACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAG---CACACCACCA 1623
Query 136 TGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 209
.|||.||..|| |||||||||||||||||||||..||||||||||||||||||||||||||||||.||||||
Sbjct 1624 GGCCTGGTGAA---TTTTTGTATTTTTAGTAGAGAAAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCC 1694
Query 210 TGACCTCAAG---------------------------------------------------------------- 219
||||||||||
Sbjct 1695 TGACCTCAAGTGATCTGCTCGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGTGTGGGCCACCACACCCTGTCT 1768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1769 CAGATGAAAGGTTAATATAATTAAGGAACATCTTTTTTGTTTTTTTTTTCAGAAATTGGAATGGGGGAGTAGCT 1842
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1843 GAACAGAAAAGTCCATCTTGTTCAATTCCCACAAGAACATTTCTTTGCAATATTATTGGCAGGAATATGCAGTA 1916
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1917 AAGTTCTAATAACTATTTACTCCTTTCTTTGAAACTCTATTCAGTTATAATGTGTCCTGTAAAAAGTATGACAC 1990
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1991 TGATTTCATAGTACCAATTTTAGCCTAATACATATTTAAATGATTCCCAATGTATAAAGATATTTTAGTAATAA 2064
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2065 GAAATTATTTAAGGATCCCAAACATCACAATAAACATAAAGCCTAGTTTTAGGTTGCAAAAAAGTATCAAACTT 2138
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2139 TATAAGTTTTAGTGCAAATTAAGAGAAATTACATTCTAACTACACTAATAACTGAAAACTTCATATTAGGCAAA 2212
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2213 TAATGTCTTCAACTACTCAAATTATAGGAGCCCACTTCAAGAACCTCAGTAAGAAGAAATTTTGAATGGTTTAA 2286
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2287 AAATAATAAATGCCATGACATTTTAAATGGAAATTTGGCATATTTTTGAGATAAATATGATTGGATACATGTGT 2360
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2361 GTGCCATTCTTTTATCTCTTCTTACTTTTACTGTATCTCTACTTTAATGATGACAATAATATGGCTACAGACAT 2434
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2435 GAAATGGTTTATCTTTCTTCTTTTCTTTCACTCTTTCATTTAAAGCATTTATATTATTTTTTATTGATGTCAAT 2508
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2509 GTTAACATTTTGGCATCCTTCCCAAGTATATTGCAAGAAATACATCAATAAAAACTTAAATTTAAAAAATATGT 2582
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2583 AGTCTGGGGCCAGATAATAATGGCATATTTCTTTAAAATTAGGTATAAAGGAGTACAGACGAGGTCAAAATTCT 2656
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2657 AAAATTGGAATCTTGCCATTAACAAACAGAACTGACATTCTGATACTTCTATCTGCTGTGGACGTGACACAGAG 2730
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2731 ACTTACCAAAGCCAAGATACATTTATTCAAGGAGGAGCAACTTGCCTTTATACTTATACCTTTGTTAATAACTT 2804
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2805 GTTTAAAGCAATCCTTTGTTTTCTTTGCATATTTGAATTGATTTGCTAAAAGTTATCTACTGTTAAATAAGCAA 2878
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2879 AACTCAAAATTTTCAAGCATATGGGACTTGTTCAGAATCAGTTTTTAGTTTCTTTTTCAGGATTTTGTACAAGT 2952
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2953 TGCAAGAGAAGAGACACAAAATTATCTTATTAATTCTATTGCAATATGGAGATACATTTTAAACAAATGGAAAT 3026
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3027 AATCAATATTAGTATTATCTGTATATTTGTGTGTGTGTGTGTTGATCTGACTATATTTTTCTTCAAAGGGAAAT 3100
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3101 CACAAAGGCCAAGTGTGTTTATCAGGTAACTCACCTTAAGAAAACTTGTACTATGTGAAAAGTCAATTTCTTTA 3174
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3175 AAAACTGTCACCAACTCAACCCTGGTTTGTAAGTAGAAAAAACTATCAATTATTTTTTAACAATAGTAATACTC 3248
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3249 CCAAGGTATATACTTCTGCCACAAAAAATTAAGAATAGTTTACTTAGCACGTTTTGTCATTGTGGAAATCATTG 3322
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3323 AGAAAAATCACAGTGGAAAGTTATTTGAAAAGGCATAACTGTCATTAGAAAGAAATTAAGAATAAAGAAGGCAG 3396
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3397 GCCTGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCTCCTGAGGTCGGG 3470
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3471 AGTTCAAGACCAGCCTGACTAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTAGCCGGGGTGGTGGC 3544
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3545 ACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGCGG 3618
Query 220 ------------------------------------------ 219
Sbjct 3619 TGAGCTGAGATGGTGCCATTGCACTCCAGCCTGGGCAAAAAG 3660
