Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12802
• Subject: NM_001330161.2
• Aligned Length: 818
• Identities: 589
• Gaps: 196

Alignment

Query   1  ATGGCGA---------CCGCCATG-TACT-TGGAGCACTATCTGGACA-GTATCGAGAACCTTCCCTGCGAACT  62
           |||| ||         .|.|||.| .||| |||||..||     ||.| |||||||||||||||||||||||||
Sbjct   1  ATGG-GAGCAAGAGTCACTCCACGAGACTCTGGAGGCCT-----GATAGGTATCGAGAACCTTCCCTGCGAACT  68

Query  63  TCAGAGGAACTTCCAGCTGATGCGAGAGCTGGACCAGAGGACGGAAGATAAGAAAGCAGAGATTGACATCCTGG  136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  69  TCAGAGGAACTTCCAGCTGATGCGAGAGCTGGACCAGAGGACGGAAGATAAGAAAGCAGAGATTGACATCCTGG  142

Query 137  CTGCAGAGTACATCTCCACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAAC  210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143  CTGCAGAGTACATCTCCACGGTGAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAAC  216

Query 211  GCCTACAGCAAGTGCAAGGAATACAGTGACGACAAAGTGCAGCTGGCCATGCAGACCTACGAGATGGTGGATAA  284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217  GCCTACAGCAAGTGCAAGGAATACAGTGACGACAAAGTGCAGCTGGCCATGCAGACCTACGAGATGGTGGATAA  290

Query 285  ACACATTCGAAGGCTTGATGCAGACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATT  358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291  ACACATTCGAAGGCTTGATGCAGACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATT  364

Query 359  TTGAAAGCTCCGGAGGGCGAGGGTTAAAAAAAGGCCGGGGTCAGAAAGAAAAAAGAGGGTCCCGGGGCCGAGGC  432
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365  TTGAAAGCTCCGGAGGGCGAGGGTTAAAAAAAGGCCGGGGTCAGAAAGAAAAAAGAGGGTCCCGGGGCCGAGGC  438

Query 433  AGGAGGACATCAGAGGAAGACACACCAAAGAAAAAGAAGCACAAAGGAG-----------GGTCTGAG--TTCA  493
           |||||||||||||||||||||||||||||||||||||||||||||||||           |.||||||  ||| 
Sbjct 439  AGGAGGACATCAGAGGAAGACACACCAAAGAAAAAGAAGCACAAAGGAGGTGGCAACAGCGTTCTGAGTCTTC-  511

Query 494  CTGACACCATCCTGTCCGTGCACCCCTCTGATGTGCTGGACATGCCC-GTGGACCCAAACGAACCCACGTACTG  566
           ||| |.||.|||||..|| |.||    ||||          |.|||| ||   |||.|.||           ||
Sbjct 512  CTG-CTCCTTCCTGCTCG-GAAC----CTGA----------AGGCCCTGT---CCCGACCG-----------TG  555

Query 567  CCT-------GTG-----------CCACCAGGTCT--------CCTATGGGGAGATGATTGGCT----GTGACA  610
           |||       |||           ||.||.|||||        ||.|    |.|.||.||  ||    |||.||
Sbjct 556  CCTTTTCTGCGTGAAAGTGGGACTCCTCCTGGTCTCTTCCTCACCCA----GTGCTGTTT--CTCAAGGTGGCA  623

Query 611  ATCCAG--ACTGTCCAATTG--AG--------------TGGTTTCA-------CTTTG--CCTG--------CG  649
           .|.|.|  .||||||.||||  ||              ||||   |       ||.||  .|||        ||
Sbjct 624  GTGCTGCTCCTGTCCCATTGCAAGACGTCGAGACAGGCTGGT---AAGGCCAGCTCTGAAGCTGGGCTCTGACG  694

Query 650  T------------GGA----CCTTACCACGAAACCCAAAGGAAAA-----------------------------  678
           |            |||    ||||          |||.|||.|.|                             
Sbjct 695  TCCAAGGCGCCAAGGAGGCCCCTT----------CCAGAGGGACAGGAGGATGGTGCAGGTGGGCAGACGGGTC  758

Query 679  ----  678
               
Sbjct 759  ATCC  762