Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12802
- Subject:
- XR_002959351.1
- Aligned Length:
- 5721
- Identities:
- 668
- Gaps:
- 5052
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCTCACTTTACACACCAGGGAAGGTCCAGCGCTGCCGAGCAGCCTGCTCAGGGTCTCCCGCTCGTAGAGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGACCCCACGCGGGACCCCTGACGTCGGCCCGGGATGGGCACAGCTTTGGGGTCGCGGTGTTTGGGGTTGTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTGGCTCTGGAGGGCCCTTGTGGGGGCGCTGCACTGGGGATCCTCATGGTCTTCGGCCTGGCACCCGCCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGAGACAGTGGCGAGTGAGCCGTGGCCTGGAGCTGGAGACCGCTGCCCTAGAGGGACGCCCGATTCTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATGTGCTCCGCTGTCTCTTGGGGGTCTGAGTAGTGGGGGGTTCCCTGGGTAGAAGAGTCAAGCTGGGGAGCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGGAGGGGAGGCCTTCTCTATCCTGGTGCCCAGCCAGTGGGCTGGCCTCCCAAGGAGGGTTGACTTTGTGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTCTGGGAGGCTGTGCCAGCCGGGAGGCTGTGCCTCTGTCCTCTAGGGGAGCTGGGAAAACACTGGGGCTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCATCAGATGCATAAGATAGAGTTAGGTTTAAAATGATTGCCTGGTAACTGTGAACAGCAGATGGGAGGGTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAAGACTGGAGGAGGCAGCCCCCCTTAGGAGCCTGTGTCAGCTGTGCAGGGGGCGGAGGTTGGCCTGGTCTAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGGTAACAAAGCAGACGCGAAAGCAGCACGGGGGTCCTCCTGGCAGACTGTGGGGAATGGTTGCGCTAGCCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGGACTATTTAAGTAAAATTAAAAATTGAATGGCGTTAGTCCCATTTCCAGTGCTCAGTAGCTCCCTATGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCACTGTCTTGGGCAGCTCAGAGAGAACATTTCTTTTCTTTTTCTTTTTTTGATTTTTTTTGAAATGGAGTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACCCTGTTGCCCAGGTTGGAGGGTATGATCTCAGCACACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGCCCTAGCCTCTCGAGTAGCTGGGACTGTAGCTGTGCACCACCACGCCTGGATAATTTTTGTATTTTTAGTA 1036
Query 1 -------------------ATGGC--------------------GACC-----------GCCATGTACTTGGAG 24
.|||| |||| ||| ||| ||||
Sbjct 1037 GAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAACTGATTTGCC-TGT-CTTG--- 1105
Query 25 CACTAT-----------CTGG----ACA-GTATCGAGAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCTGA 82
|| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 ----ATCTCCCAAAGTGCTGGGATTACAGGTATCGAGAACCTTCCCTGCGAACTTCAGAGGAACTTCCAGCTGA 1175
Query 83 TGCGAGAGCTGGACCAGAGGACGGAAGATAAGAAAGCAGAGATTGACATCCTGGCTGCAGAGTACATCTCCACG 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 TGCGAGAGCTGGACCAGAGGACGGAAGATAAGAAAGCAGAGATTGACATCCTGGCTGCAGAGTACATCTCCACG 1249
Query 157 GTGAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAACGCCTACAGCAAGTGCAAGGA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 GTGAAGACGCTGTCTCCAGACCAGCGCGTGGAGCGCCTGCAGAAGATCCAGAACGCCTACAGCAAGTGCAAGGA 1323
Query 231 ATACAGTGACGACAAAGTGCAGCTGGCCATGCAGACCTACGAGATGGTGGATAAACACATTCGAAGGCTTGATG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 ATACAGTGACGACAAAGTGCAGCTGGCCATGCAGACCTACGAGATGGTGGATAAACACATTCGAAGGCTTGATG 1397
Query 305 CAGACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCTCCGGAGGGCGA 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398 CAGACCTGGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCAGTGATTTTGAAAGCTCCGGAGGGCGA 1471
Query 379 GGGTTAAAAAAAGGCCGGGGTCAGAAAGAAAAAAGAGGGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGA 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472 GGGTTAAAAAAAGGCCGGGGTCAGAAAGAAAAAAGAGGGTCCCGGGGCCGAGGCAGGAGGACATCAGAGGAAGA 1545
Query 453 CACACCAAAGAAAAAGAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATG 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546 CACACCAAAGAAAAAGAAGCACAAAGGAGGGTCTGAGTTCACTGACACCATCCTGTCCGTGCACCCCTCTGATG 1619
Query 527 TGCTGGACATGCCCGTGGACCCAAACGAACCCACGTACTGCCTGTGCCACCAGGTCTCCTATGGGGAGATGATT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 TGCTGGACATGCCCGTGGACCCAAACGAACCCACGTACTGCCTGTGCCACCAGGTCTCCTATGGGGAGATGATT 1693
Query 601 GGCTGTGACAATCCAGACTGTCCAATTGAGTGGTTTCACTTTGCCTGCGTGGACCTTACCACGAAACCCAAAGG 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1694 GGCTGTGACAATCCAGACTGTCCAATTGAGTGGTTTCACTTTGCCTGCGTGGACCTTACCACGAAACCCAAAGG 1767
Query 675 AAAA---------------------------------------------------------------------- 678
||||
Sbjct 1768 AAAATGGTTCTGTCCACGGTGTGTCCAGGAAAAGAGGAAGAAGAAGTAGGAGGAGCTGTGTGCCCGGATCCGAG 1841
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1842 GAGCAAGTTAATCTGTCCCTTCATTCGTGTCGCAATATTTCCCTTCCTTTTAAAACTACCTTGTTCGGTTGATA 1915
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1916 CTTAGTAACTCCGTGGCCAGTTGAAGCGCTGGATGTTTCCTAGAACAAGAACCACCAAAGCCTGTTCGCACAGA 1989
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1990 AGGGCGACCTTGCAGGGACTCGCCGCCGCGACCTCAGTGTGGCTTTTACAGGACTCCCCCCGAGCATCAGCAGG 2063
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2064 GACCCCGGCGGACGTGGGCGGGCGCGCGTGAGCTCGGGCTGCCCGGCCGGGCGTGCGGGCGGGGACATGGTAAC 2137
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2138 CTGGTCCACGGAGGGCGGCCGCCACCCTCGCGTAGCTTTCCTGTGGTTTTCCAGGACTGTCCGGTACAGCCCGG 2211
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2212 GCTCCGCGTGCCCCGCCCGCTGGAGCACCTGCCACCGAGGCGCGCGTGGGGCCACTGCCGTGGCGGCGGCTGCC 2285
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2286 CTCCTCACACTCGGCTCCGCGCCGCCTCCGGCCACCGTGCGCTCCCGCGTGGGGCGCCTCGGATGGGCCCGGGA 2359
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2360 GGGCTGGGGGCTCTTCCCTGGAGGAAGCGGCCTCCGCTTCGCTGGCGCCGCCTTTTTAGCTTGGACTTCAGTCC 2433
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2434 TCCCTCGGGGACTCACCTCCGGAGTAAACGGCTCTTCATTAGCTTGGAGTGGCCGCAGGTCCCGTGACCAGCAC 2507
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2508 CCGCGAGACCCTGTGCGACAGCTGGGCTGATGCTCCGTTTCTCTGGGAATTGGTGATTTTTTACTGTGAAGATG 2581
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2582 AAATTACCCTAATAGCATGAAGATCGTGGGTCTGTGTGTCCGTGAAGTGAGTCCCGTCTGCCAGGAGCTGACGA 2655
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2656 ACCACGAATGCTTCTGCCTGTGCTGTGCATTCCCAGGCCCGCAGCTCCCGGTCGAGGGGACTCCGATGTGAATT 2729
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2730 TGTTGTGAATTTGTTGTGCCACAATAGCAGTTCTGGAATGAAGCTAGGAAACTCGAGTGTGCTTTTTGTTTAAT 2803
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2804 GAGCGTTCACCAAGCTGAGCCGGAGCCATCCTTTCGGTGGTAGTTGGGGAAGGCTATGCAGATTTGCTCTGTTG 2877
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2878 TGACGCGTTGGTGACGGTGCCCAGCCTGCGGTTCCCCACAGCATCGCAGGCGCTCGGAAATCCTCTCCCGTGCC 2951
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2952 TTTAGAGGAAGGAGAGGATTGCTGAGGAATGCAGGGACGCCTGTTTCTGTCCTCACACCACAGAAAGAAACCTG 3025
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3026 AGGGAAAACTGAGACGTGAGGTTCCTGATTTAAGAAGCCTGGGTTTCTTCATGGTGGGGGGCCATTTGGAATGA 3099
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3100 CAGCCTCACTTCCTTCTGATGGCTACATCTGTATCTTTTCCTCCTGTGTTTAATGTTTCACTAGGGAGAGGAAA 3173
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3174 TAAAGCAGAAGGAACGTGTGAAGCTCTGTGTCTCAGACGGGGCCCTCCCGTCGAGAAGCTGGTAGTCAGTGAGT 3247
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3248 GAGAACAAGAGAACAAGAACACCCTGAACAGTCCTGGTTGGGATGGTGTCCACATTCATGTTCTGCGGTTCTTG 3321
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3322 AACACACGGATGCCTCTGGGCCACCTGTCCTTTTCCGAGGGTGTGGGTGGGAGTGGATCCTCCGGGCGCAGGTG 3395
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3396 CCAGGCAGGTGCAGGCGGGCGGTCGGCCACTGCTGCTGCTCGTCCCTGCCAGTGTCTGGGCCTGAAGGGGCTCC 3469
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3470 CTCCAAGCGGTGCCTTCCTGCGGCTTAGAAGGGAAAGCGCCAGAGAGGGCAGGCTACAGTGCTTCACACCCTTC 3543
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3544 GCCACGGCTGTGAAACTGGAGATGGGTGGGTTTTGTATGTTAATTTTTTTTTTTGAGACGGAGTCTTGCTCTGT 3617
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3618 CACCCAGGCTGGAGAGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCT 3691
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3692 GCCTCAGCCCCCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTATATTTTTAGTA 3765
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3766 GAGACAGGGTTTCACCATGTTAACCAGGATGGTCTCGATCTCCTGACCTCACGATTTGCCCGCCTCGGCTTCCC 3839
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3840 AGAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCACCCAGCTAAGTTTGTATTTTTGTTGGAGACGGG 3913
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3914 GTTTCACCATATTGGCCAGACTGGTCTCAAACTCCTGGGGTCAAATGATCCGCCTGCGTCGGCTTCCCAGAGTG 3987
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3988 CTGGGATTACAGGTGTCAGCCACTGCGCTCAGCTGGGAGATGAATTTTCATTTAATGACTTAACTTTTTGTTAG 4061
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4062 CACAGGTTTTGTGTGTGTGTGTGTGTGTGTGTTTTGTTTTTTGTTTTGTGTTTTTGAAACGGAGTTTTGCTCTG 4135
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4136 TCACCCAGGCTGGAATGCAATGGCACCATCTTGGCTCACTGCAACCTCTGCTTCCTGGGTTCAAGTGATTCTCT 4209
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4210 TGCCTTAGCCTCCCGAGCAGCTGGGATTATAGGCGTCCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAG 4283
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4284 AAATGGGGTTTCACCATGTGTGGCCAGGCTGGTCTCGAACTCCTGACCTGAAGTGATCCACCCGCCTCGACCTC 4357
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4358 CCAAAGTGCTGGGATGACAGGCATGAGCCACCGCACCCGGCCAACACAGATGTTTATTGATCGTGGAGGATACA 4431
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4432 TTGTGGAAAATGTTTTTCTCTCTTTTACCATTTTTGGGAAGAGGGATAGGTAAGTGCAGGGAGTTTGTGCTGAA 4505
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4506 ACAGCGCCTGGCAATTTTTCAGAAATGAATTTGATATTGCGCTCCACCTTTGAGCTGTTCACACCTGTGGCTAC 4579
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4580 CCCTGGAAAGCGCTGGGGTTGTTGATGCTTTTGGCTGCCCGGCTTCCTGAGGTCTCGCTGCTTTTTGGGGAAAG 4653
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4654 ATGACTGGCTTCCCTGTGGGACGCTTTTGTCTGACACGTGATGATGTGGTCCTGCCTGCCACTGTGCACCATCC 4727
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4728 CAGTGCTGCGGTATCAGTCAGTGATCTGAGGAAATCCTGTAGGGGAAGGCAGGCTGCAGTGAAAACAGGAGCTG 4801
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4802 GTGAAACCGAGCCCTCTGCATCTGCGAATGTGCCCTAGGTGCTGCTGCTGGGGACATGGATGCCAAGCGGAGGC 4875
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4876 CTGCGTGGCCTCCTGAGCAGCAGCTGACCGCCCGTCTCATGCTGGACGGGACCCCTGGGCGGGTGGACATGAGA 4949
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4950 CCACTGTTGGCCAGGGACGCCGTGCGGAGGCCTACGTGGCTGCCTGAGCAGCAGCTGACCGCCCGTCTCACTGT 5023
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5024 TGGCCAGGGCTTTGTGGCGTGGGTGTTTTCCAGTCTGCCTGGAGCAGCGAGAAGCAGCTGTGCAGACTGGTGGC 5097
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5098 GGTGGGAGGGTTTGCTGGGACTGATGGGGACACCGGCCAGCTTGTCTGGTGTCCAGCAGCCCTGCCGGACTTGG 5171
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5172 CCTCCTGTCCTGTCGTTGGGAGCCCTGGCTGGGGCTGCTTTGAGCAATGACGCTGGCCCAGAGCAGCTTCCCAC 5245
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5246 ATGACCCCAGAGCCGAGGGTCTGCCCTGTCCTAGGTTAGGTCTTCATGGTTTAGAGTAAAACCGTGAGGGATGT 5319
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5320 TAATTATGGGCATTGAAGACTTAAGGTTTTCTTAAATTTTTAGTGAGCAGTGATTGGCCTTCAATACTTGTGCT 5393
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5394 GAGAGGAATTTTAAGCCAGGGGAAGTGTAAGAAAATGTTCCCATTCAGGAGAGATTGTGTTGGAGTTTCTTTCT 5467
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5468 TCCTCTGTATGTATTTTGTGGTGTCCACCTTTAACCACGTTTCATCCAAAACGATGATGCAGCTTTAACATGAA 5541
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5542 TGTTACATTTTTATTTTCAAGGAATTATTATCTATGTTCCCTTTGTAAAGGAAAGATAATGTTGTAAATCTTTT 5615
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5616 TATTAGATAATGTAAAGATGTATATCAGTATTTTTGGATCATGTTATAGATTATGGATATATTGTTTAATAAAT 5689
Query 679 ----------------------- 678
Sbjct 5690 AAAGTATTTTTTGGAACAAACAA 5712
