Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12837
- Subject:
- NR_136695.2
- Aligned Length:
- 3544
- Identities:
- 1451
- Gaps:
- 2092
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGGGGAAACTCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGATATCCTCCTTGGCCAGGAAAGATTGTTAATCCACCAAAGGACTTGAAGAAACCTCGCGGAAAGAAATGCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTGTGAAATTTTTTGGAACAGAAGATCAATAGACCCAGCCCCATTTCTCTATCACAAGCCAGCTTAGCAGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGGTGGCAGTATTTCAAGGAGATCGCTGGCCTGGAGCTGTGGAGCCAGAGCTTCTGGAAGAGGGAATGTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGAACTCCATGGATTTAAAAAGAAGATTTGGCCGGGCATGGTGCCTCAGGCCTGCAATCCCAGTACTTTGGGA 370
Query 1 -----------------------------------------------------------ATGATAAAAATTAAC 15
|||||||||||||||
Sbjct 371 GGCCAAGTGCCTGGATCAAAGTGGAACAGCTGAAGCCATATCATGCTCATAAAGAGGAAATGATAAAAATTAAC 444
Query 16 AAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGAC 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGGTAAACGATTCCAGCAAGCGGTAGATGCTGTCGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGAC 518
Query 90 GTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTGAGGAGAGAAGTAGGCCAAACTCAGGTG 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTCATCCCACAATTCTTCTGATGACAAGAATCGACGTAATTCCAGTGAGGAGAGAAGTAGGCCAAACTCAGGTG 592
Query 164 ATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAACATGGGAGAAGGAAAGAAGAGGGTGTCT 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAACATGGGAGAAGGAAAGAAGAGGGTGTCT 666
Query 238 TCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCGGGGTCG 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCGGGGTCG 740
Query 312 GCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCGTGAAGGGGATGATGGCCGGACCGATGG 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCCCCCAAAGGATGAGAAGGATCTCACCATCCCGGAGTCTAGTACCGTGAAGGGGATGATGGCCGGACCGATGG 814
Query 386 CCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTA 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCGCGTTTAAATGGCAGCCAACCGCAAGCGAGCCTGTTAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTA 888
Query 460 AGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAAGTTGAAAATATGTGAAGAGGAAACTGG 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCCAAACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACGAAGAAGTTGAAAATATGTGAAGAGGAAACTGG 962
Query 534 CTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCATCACACCCACAGACAAAAAGATAGGAT 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCCACCTCCATCCAGGCAGCTGACAGCACAGCCGTGAATGGCAGCATCACACCCACAGACAAAAAGATAGGAT 1036
Query 608 TTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTAAAAATGGGTCACACAGTGACTGTCTGG 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCCAACTTGCTAAAAATGGGTCACACAGTGACTGTCTGG 1110
Query 682 AACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCGTCTGGGAAGAACCCCCGCTGAAGTCGT 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCGTCTGGGAAGAACCCCCGCTGAAGTCGT 1184
Query 756 CTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGGCCAAGGACCTGGTGCTGGGCCCCAGTG 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTCAACCTGCGACATCACTTTCGCCTGCGTGTCGGATCCCAAGGCGGCCAAGGACCTGGTGCTGGGCCCCAGTG 1258
Query 830 GTGTGCTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAG 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGTGCTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAG 1332
Query 904 CTGGCCCAGGTGATTGTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAA 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGGCCCAGGTGATTGTGTCCAGGGGGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAA 1406
Query 978 TGACGGGATGTTGGTGATCTTAGCGGCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGA 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGACGGGATGTTGGTGATCTTAGCGGCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGA 1480
Query 1052 TGGGGAAGACCTCCTTCTTCCTAGGTGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAA 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGGGGAAGACCTCCTTCTTCCTAGGTGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAA 1554
Query 1126 GGGAGCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGAGCTTCATGGCCACTATTGCCGAGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTT 1628
Query 1200 GGACATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACT 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGACATCCTCAATCAGGGACAGTTGGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACT 1702
Query 1274 TTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCAAC 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCAAC 1776
Query 1348 CATCCGACTCCCATGGCAGCTGCAGCAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCCGACAACGA 1421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1777 CATCCGACTCCCATGGCAGCTGCAGCAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCTGACAACGA 1850
Query 1422 TATGTCCGCCGTGTACCGAGCCTACATACAC------------------------------------------- 1452
|||||||||||||||||||||||||||||||
Sbjct 1851 TATGTCCGCCGTGTACCGAGCCTACATACACTAAGCTGTCGACACCCCGCCCTCACCCCTCCAATCCCCCCTCT 1924
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1925 GACCCCCTCTTCCTCACATGGGGTCGGGGGCCTGGGAGTTCATTCTGGACCAGCCCACCTATCTCCATTTCCTT 1998
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1999 TTATACAGACTTTGAGACTTGCCATCAGCACAGCACACAGCAGCACCCTTCCCCTGAGGCCGGTGGGGAGGGGA 2072
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2073 CAAGTGTCAGCAGGATTGGCGTGTGGGAAAGCTCTTGAGCTGGGCACTGGCCCCCCGGACGAGGTGGCTGTGTG 2146
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2147 TTCACACACACACACACACACACACACACACACACACACAGGCTCTCGCCCCAGGATAGAAGCTGCCCAGAAAC 2220
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2221 TGCTGCCTGGCTTTTTTTCTTCCGAGCTTGTCTTATCTCAAACCCCTTCCAGTCAAGGAACTAGAATCAGCAAC 2294
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2295 GAGAGTTGGAAGCCTTCCCACAGCTTCCCCCAGAGCGAAGAGGCTGTAGTCATGTCCCCATCCCCCACTGGATT 2368
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2369 CCCTACAAGGAGAGGCCTTGGGCCCAGATGAGCCAGTACAGACTCCAGACAGAGGGGCCCTTGGGGCCCTCCAA 2442
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2443 CCTCAGGTGATGAGCTGAGAAAGATGTTCACGTCTAAGCGTCCAGTGTGCACCCAGCGCTCCATAGACGCCTTT 2516
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2517 GTGAACTGAAAAGAGACTGGCAGAGTCCCGAGAAGATGGGGCCCTGGCTTTCCAGGGAGTGCAGCAAGCAGCCG 2590
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2591 GCCTGCAGACCCAGCCTGACCAACGATGAGCATTTCTTAGGCTCAGCTCTTGATACGGAAACGAGTGTCTTCAC 2664
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2665 TCCAGCCAGCATCATGGTCTTCGGTGCTTCCCGGGCCCGGGGTCTGTCGGGAGGGAAGAGAACTGGGCCTGACC 2738
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2739 TACCTGAACTGACTGGCCCTCCGAGGTGGGTCTGGGACATCCTAGAGGCCCTACATTTGTCCTTGGATAGGGGA 2812
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2813 CCGGGGGGGGCTTGGAATGTTGCAAAAAAAAAAGTTACCCAAGGGATGTCAGTTTTTTATCCCTCTGCATGGGT 2886
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2887 TGGATTTTCCAAAATCATAATTTGCAGAAGGAAGGCCAGCATTTACGATGCAATATGTAATTATATATAGGGTG 2960
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2961 GCCACACTAGGGCGGGGTCCTTCCCCCCTCACAGCTTTGGCCCCTTTCAGAGATTAGAAACTGGGTTAGAGGAT 3034
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3035 TGCAGAAGACGAGTGGGGGGAGGGCAGGGAAGATGCCTGTCGGGTTTTTAGCACAGTTCATTTCACTGGGATTT 3108
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3109 TGAAGCATTTCTGTCTGAACACAAAGCCTGTTCTAGTCCTGGCGGAACACACTGGGGGTGGGGGCGGGGGAAGA 3182
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3183 TGCGGTAATGAAACCGGTTAGTCAATTTTGTCTTAATATTGTTGACAATTCTGTAAAGTTCCTTTTTATGAATA 3256
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3257 TTTCTGTTTAAGCTATTTCACCTTTCTTTTGAAATCCTTCCCTTTTAAGGAGAAAATGTGACACTTGTGAAAAA 3330
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3331 GCTTGTAAGAAAGCCCCTCCCTTTTTTCTTTAAACCTTTAAATGACAAATCTAGGTAATTAAGGTTGTGAATTT 3404
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3405 TTATTTTTGCTTTGTTTTTAATGAACATTTGTCTTTCAGAATAGGATTGTGTGATAATGTTTAAATGGCAAAAA 3478
Query 1453 ------------------------------------------------------------------ 1452
Sbjct 3479 CAAAACATGATTTTGTGCAATTAACAAAGCTACTGCAAGAAAAATAAAACACTTCTTGGTAACACA 3544
