Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12837
Subject:
NR_136697.1
Aligned Length:
3445
Identities:
1451
Gaps:
1993

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAGTAGCGGCGTGGCCAGTGACAGCCGGCCCCCGTCACGTGGTCGGGCCCACTCCAATGGGCGGCGCCGGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACTTGCTGTTCCCGGCGGCCCGTGCGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGACTTGGTGTGGGGGAAACTCGGCCGATATCCTCCTTGGCCAGGAAAGATTGTTAATCCACCAAAGGACTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAGAAACCTCGCGGAAAGAAATGCTTCTTTGTGAAATTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGA  296

Query    1  ----------------------------------ATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGG  40
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACAGCTGAAGCCATATCATGCTCATAAAGAGGAAATGATAAAAATTAACAAGGGTAAACGATTCCAGCAAGCGG  370

Query   41  TAGATGCTGTCGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGAC  114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TAGATGCTGTCGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTTCTGATGAC  444

Query  115  AAGAATCGACGTAATTCCAGTGAGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTC  188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGAATCGACGTAATTCCAGTGAGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTC  518

Query  189  TGAAGGGAAGGTGAAGAAGAACATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCA  262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAAGGGAAGGTGAAGAAGAACATGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCA  592

Query  263  AATCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTC  336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AATCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTC  666

Query  337  ACCATCCCGGAGTCTAGTACCGTGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGC  410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCATCCCGGAGTCTAGTACCGTGAAGGGGATGATGGCCGGACCGATGGCCGCGTTTAAATGGCAGCCAACCGC  740

Query  411  AAGCGAGCCTGTTAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCT  484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAGCGAGCCTGTTAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAGAAGCCAGCTGTCT  814

Query  485  GTTACCAGGCAATCACGAAGAAGTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGAC  558
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTTACCAGGCAATCACGAAGAAGTTGAAAATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGAC  888

Query  559  AGCACAGCCGTGAATGGCAGCATCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAG  632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGCACAGCCGTGAATGGCAGCATCACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAG  962

Query  633  TGGAATCGTCTCCAACTTGCTAAAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATT  706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGGAATCGTCTCCAACTTGCTAAAAATGGGTCACACAGTGACTGTCTGGAACCGCACTGCAGAGAAATGTGATT  1036

Query  707  TGTTCATCCAGGAGGGGGCCCGTCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCC  780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGTTCATCCAGGAGGGGGCCCGTCTGGGAAGAACCCCCGCTGAAGTCGTCTCAACCTGCGACATCACTTTCGCC  1110

Query  781  TGCGTGTCGGATCCCAAGGCGGCCAAGGACCTGGTGCTGGGCCCCAGTGGTGTGCTGCAAGGGATCCGCCCTGG  854
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGCGTGTCGGATCCCAAGGCGGCCAAGGACCTGGTGCTGGGCCCCAGTGGTGTGCTGCAAGGGATCCGCCCTGG  1184

Query  855  GAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGGG  928
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACCGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGGG  1258

Query  929  GGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGACGGGATGTTGGTGATCTTAGCG  1002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GGGGGCGCTTTCTGGAAGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGACGGGATGTTGGTGATCTTAGCG  1332

Query 1003  GCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCTTCTTCCTAGG  1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GCTGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCTTCTTCCTAGG  1406

Query 1077  TGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAAGGGAGCTTCATGGCCACTATTGCCG  1150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGAAGTGGGCAATGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAAGGGAGCTTCATGGCCACTATTGCCG  1480

Query 1151  AGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTG  1224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGGGGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTG  1554

Query 1225  GCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATA  1298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATA  1628

Query 1299  CATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCAACCATCCGACTCCCATGGCAGCTGCAG  1372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CATTCAGAAGGATCTCCGCTTAGCCATTGCGCTGGGTGATGCGGTCAACCATCCGACTCCCATGGCAGCTGCAG  1702

Query 1373  CAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCCGACAACGATATGTCCGCCGTGTACCGAGCCTAC  1446
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1703  CAAATGAGGTGTACAAAAGAGCCAAGGCGCTGGACCAGTCTGACAACGATATGTCCGCCGTGTACCGAGCCTAC  1776

Query 1447  ATACAC--------------------------------------------------------------------  1452
            ||||||                                                                    
Sbjct 1777  ATACACTAAGCTGTCGACACCCCGCCCTCACCCCTCCAATCCCCCCTCTGACCCCCTCTTCCTCACATGGGGTC  1850

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1851  GGGGGCCTGGGAGTTCATTCTGGACCAGCCCACCTATCTCCATTTCCTTTTATACAGACTTTGAGACTTGCCAT  1924

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1925  CAGCACAGCACACAGCAGCACCCTTCCCCTGAGGCCGGTGGGGAGGGGACAAGTGTCAGCAGGATTGGCGTGTG  1998

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1999  GGAAAGCTCTTGAGCTGGGCACTGGCCCCCCGGACGAGGTGGCTGTGTGTTCACACACACACACACACACACAC  2072

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2073  ACACACACACACACAGGCTCTCGCCCCAGGATAGAAGCTGCCCAGAAACTGCTGCCTGGCTTTTTTTCTTCCGA  2146

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2147  GCTTGTCTTATCTCAAACCCCTTCCAGTCAAGGAACTAGAATCAGCAACGAGAGTTGGAAGCCTTCCCACAGCT  2220

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2221  TCCCCCAGAGCGAAGAGGCTGTAGTCATGTCCCCATCCCCCACTGGATTCCCTACAAGGAGAGGCCTTGGGCCC  2294

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2295  AGATGAGCCAGTACAGACTCCAGACAGAGGGGCCCTTGGGGCCCTCCAACCTCAGGTGATGAGCTGAGAAAGAT  2368

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2369  GTTCACGTCTAAGCGTCCAGTGTGCACCCAGCGCTCCATAGACGCCTTTGTGAACTGAAAAGAGACTGGCAGAG  2442

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2443  TCCCGAGAAGATGGGGCCCTGGCTTTCCAGGGAGTGCAGCAAGCAGCCGGCCTGCAGACCCAGCCTGACCAACG  2516

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2517  ATGAGCATTTCTTAGGCTCAGCTCTTGATACGGAAACGAGTGTCTTCACTCCAGCCAGCATCATGGTCTTCGGT  2590

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2591  GCTTCCCGGGCCCGGGGTCTGTCGGGAGGGAAGAGAACTGGGCCTGACCTACCTGAACTGACTGGCCCTCCGAG  2664

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2665  GTGGGTCTGGGACATCCTAGAGGCCCTACATTTGTCCTTGGATAGGGGACCGGGGGGGGCTTGGAATGTTGCAA  2738

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2739  AAAAAAAAGTTACCCAAGGGATGTCAGTTTTTTATCCCTCTGCATGGGTTGGATTTTCCAAAATCATAATTTGC  2812

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2813  AGAAGGAAGGCCAGCATTTACGATGCAATATGTAATTATATATAGGGTGGCCACACTAGGGCGGGGTCCTTCCC  2886

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2887  CCCTCACAGCTTTGGCCCCTTTCAGAGATTAGAAACTGGGTTAGAGGATTGCAGAAGACGAGTGGGGGGAGGGC  2960

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2961  AGGGAAGATGCCTGTCGGGTTTTTAGCACAGTTCATTTCACTGGGATTTTGAAGCATTTCTGTCTGAACACAAA  3034

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3035  GCCTGTTCTAGTCCTGGCGGAACACACTGGGGGTGGGGGCGGGGGAAGATGCGGTAATGAAACCGGTTAGTCAA  3108

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3109  TTTTGTCTTAATATTGTTGACAATTCTGTAAAGTTCCTTTTTATGAATATTTCTGTTTAAGCTATTTCACCTTT  3182

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3183  CTTTTGAAATCCTTCCCTTTTAAGGAGAAAATGTGACACTTGTGAAAAAGCTTGTAAGAAAGCCCCTCCCTTTT  3256

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3257  TTCTTTAAACCTTTAAATGACAAATCTAGGTAATTAAGGTTGTGAATTTTTATTTTTGCTTTGTTTTTAATGAA  3330

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3331  CATTTGTCTTTCAGAATAGGATTGTGTGATAATGTTTAAATGGCAAAAACAAAACATGATTTTGTGCAATTAAC  3404

Query 1453  -----------------------------------------  1452
                                                     
Sbjct 3405  AAAGCTACTGCAAGAAAAATAAAACACTTCTTGGTAACACA  3445

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