Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12945
- Subject:
- NR_037578.1
- Aligned Length:
- 3189
- Identities:
- 735
- Gaps:
- 2331
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCGGAGTCGCACTGCTTAAAGGAACTGCCCCAGAAGGCAAGATGGTGACCGGGCCTGCGGCGAGACGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCAGCATGCCTAGCGGCCGGCCGGGAGCCGAGTGATGGGGATCCGGTAGGACCCGGCGAGCGGCCGAAGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGGTGCAGCCGCGGGCCCGGGCGTTGGGCGCTCACAGAGAGCCAAGATGGAGACGTGGCGCTGTATACTCCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTCCCTATCCTCTAAAGAGTTTGGGTCGAGACTGGACCACGCCGTGGGAGGATCTACAGAAATATTGCTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGACACATTTCCAGTTGTCTGAGGTGGCCAGGACATTACTCCCGTGCGCCTTACCCATACTTCAGTAGCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATTTCTCATTGAACTGTAGACCACCTTTTCTGTTTGAGTCTGGAACGCAGTTTCAGTACTATAATTGGAGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGACCACCTTAGCAACGCATCCTTGATCCATCTCTCTCGTCACGTCATGACCTCTGACAGAGATGAGCCCTTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTAAACGAAGAAAACATCAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATACG 592
Query 1 ---------------------------------------------------------------------ATGTC 5
|||||
Sbjct 593 AAGGACCTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATGTC 666
Query 6 CTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTAC 79
.|||||.||.||.||.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.||||
Sbjct 667 TTATAACATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTTAC 740
Query 80 ACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAA 153
|||||||||||.||||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|||
Sbjct 741 ACTGGAGTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGGAA 814
Query 154 GTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGAT 227
||||||||||||||||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.||
Sbjct 815 GTTCAAGAAGATCATTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAAAT 888
Query 228 GCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACC 301
|...|||||||||||.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.|||||||
Sbjct 889 GAAAACAGGAAGGAAGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAACC 962
Query 302 CAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCC 375
|||||||.||||.|||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||||
Sbjct 963 CAGTGGAGTTCTGCCGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGCCC 1036
Query 376 AAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGA 449
||.||.|||...|||||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||||
Sbjct 1037 AAGATCCCACGCGCTGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGTGA 1110
Query 450 TATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCT 523
.|||||||||||.||..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.||
Sbjct 1111 CATTAAGCTGACCCAGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTCCT 1184
Query 524 GCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAA 597
|.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1185 GTCCTATTGTCATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAAAA 1258
Query 598 TTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATC 671
||.|||||||||||.|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTAAATTATGAAGGTCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATC 1332
Query 672 TATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAG 745
|||||||||||||||||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||||
Sbjct 1333 TATTCCAATTTGGCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGTAG 1406
Query 746 AAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCT 819
||||.||||||||||||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.||||.
Sbjct 1407 AAAAAACAGACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGTCC 1480
Query 820 TCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT----------------------------------- 858
||..||.||||||||..||||||.|||||||||||.|||
Sbjct 1481 TCGCATCTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAGGT 1554
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1555 GACCACCTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGCTC 1628
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1629 AGGGGCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGCAA 1702
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1703 GACTTGTGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTCAG 1776
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1777 GCTTGAGCTCTGACTGCTGCTCATTCACGGGACTTCCTGTCTGTATTCTTTTCGAAGGATGTAAAAATTTTAAG 1850
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1851 TATTTGTATGCTGTTCACTTTTTGTGATGTGGGGTTCTGAATTTCTGTTATATGCTTGAAACAGATTGGAAGAA 1924
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1925 ACAAATTTACAACTTTTTTTTAAATGAAATATTTTCCTGACAACTGATGTTTAAAGAACTTTATGGTAAATGAC 1998
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1999 TTCTAAGTCCTGTTAAAGTTGACAGCATTTTTAAAATGTAGTTCATCTTGGCCCTGAAGATAGGAAGTCAGTGC 2072
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2073 TTTTTAGTTCATCCGGTGGTCCTGCCCGGACCTGCAAAGCTCAGCATGCTGCCTTTTCTGGAGACCCAGTTTCA 2146
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2147 TTGGGAGAAGCCTGTGCGTGTTCTTAGAAATCACTGGGTCACTCACTCCTCCACAGGGTCCAAGCTTCTGAAGA 2220
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2221 GGCTTGACAATGTGTATGCTGTAGAGAACATTGGCCCATGTCACTGCTGCCCTGAGCTGTGGGATGTGCCTACA 2294
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2295 TTTTGTAGTGGAAATAGTTGAGAAGTATAGATCACTCTCATACGATACGGTGGTGCACACCTTTAATCTTATTA 2368
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2369 GCATTTGGCTGATGGCAGCAGGTAGCTGTGTAAAGCCAGCTTTAGCAACACAACAAGTGTGAGGGCAGCCTGGG 2442
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2443 CTACATGAAACCCTATCTTAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTCAAGTCCTTTATATATGTC 2516
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2517 CACTCCTGCCTGGAAAAGGTTGCCATAAGGAAAGTAGATGAGCCAGGTGCATCCACAAACACCCTTAATCCCAG 2590
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2591 CATCTGGGAGACAGAGGCAGGAGGATCACTGTGTCCCAGGCTGACTAGAACTACACACAAGGCCCTGTGTCTCA 2664
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2665 AAGACCAGCAAAAGGTGGCAGACTCCAGGTTGTCCCTCTGTCTCCTGTACTTGTCTTTCTGTTTAACGATGGTG 2738
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2739 AAAGGCCCTTGGGTCAGGAGTGACATTTCGTTGAGCCGGTTTTGTATAAATGTATTAGAGAAGTGGTCTTTGGA 2812
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2813 AGGAAGCGAGAGCTCCGCAGCTGTTTATCATTTGCCTCTAACATGCAGGAGTCATCATGGGAGCTGTCACTTAG 2886
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2887 ACCCGGTAGGGAGCCTCGCTGACTGTTGACTGTACAGTTGAGTTTGGTACCGTGGTACAGCAGGGTGCCATGGC 2960
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2961 GCTTGCACTGTTCTCTGCAGCCTCACAGCAGCCTGACCAGCCAGTAGCTTGCCCTGTACAAGTGTCCAGTAGTA 3034
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3035 AAATTCTAAATGTAAGTAGAAATTTCTCTGCTTTTTAAAATAGTAGACTCAGATTACAGGCATTTTTACTAAGT 3108
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3109 CATTACTGTGCAGTAATAAATGTTCTCTACAGTGAGTTTTATTAATAGAATGTTTTATATTAGACAATAAATCT 3182
Query 859 ------- 858
Sbjct 3183 TTGCAAT 3189
