Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12959
- Subject:
- XM_006714935.3
- Aligned Length:
- 1763
- Identities:
- 761
- Gaps:
- 937
Alignment
Query 1 -----------------------------------------------------------------------ATG 3
|.|
Sbjct 1 ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG 74
Query 4 GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT 69
| ||||| |||..|.| |||.|| || |||||| .|||| ||..|| ||||..| ||||| |
Sbjct 75 G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T 134
Query 70 ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT 139
|||| ||.| || ||.|||| ||.||||||..|..||||| .||.||||
Sbjct 135 GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT 182
Query 140 ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC--- 189
|||||..| ||....||.| ||||.|| |..|| |.| .|||.||||..||
Sbjct 183 GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG 252
Query 190 AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 245
.||.|| ||.|.|||.|.||.| |.|||||||||||||||||||||||||||||||||
Sbjct 253 GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 326
Query 246 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 400
Query 320 ACCCTGGTCCTCCA---------------------------GGACCCCTGGGTTTGGATGGCAAGCCCGGACTT 366
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 401 ACCCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTACCCGGGACCCCTGGGTTTGGATGGCAAGCCCGGACTT 474
Query 367 CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC 548
Query 441 TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG 622
Query 515 GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG 588
|||||||||||||||| ||||||||||||||||||||||
Sbjct 623 GAGCACAAGGCCCAGC------------------------------------GGGCCCAAAGGGACCCCCAGGG 660
Query 589 CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC 734
Query 663 CAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGC 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 CAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGC 808
Query 737 CTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGACGTCCGGGATCCT----GGC----------- 795
||||||||||||||||||||||||||||||||||||||||||.| ||.|| ||| |||
Sbjct 809 CTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC--CCAGG--CCTCAAGGGCGAGCAGGGAGA 878
Query 796 ----------CTCGGCTCTG---------TCT-------CCTCATG----CTCC-------CAGAGGC-----T 827
.|||.||.|| ||| |||||.| |||| |||.||| .
Sbjct 879 CACAGTGGTGATCGACTATGATGGCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACCACAGGGGCCCCCAG 952
Query 828 GGCTTCTTCCTCCAAAAAAAATGGATC---TGAGCC-----CCCGCCTGGCTGTGCAGGGTGCCCCAGGCCTC- 892
|| ||.|| |.||||| .||||| |..||.|||.| |||..|||||||||||..||
Sbjct 953 GG------CCACC-------AGGGATCCCTGGAGCCAAGGGCGAGCTTGGAT-TGCCCGGTGCCCCAGGAATCG 1012
Query 893 --------AAGGGC-------GAGCAG---GGAGACACAGTGGTGATC------------GACTA--------- 927
|||||| || ||| ||||||.|| ||.||.| ||||.
Sbjct 1013 ATGGAGAGAAGGGCCCCAAAGGA-CAGAAAGGAGACCCA--GGAGAGCCTGGGCCAGCAGGACTCAAAGGGGAA 1083
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1084 GCAGGCGAGATGGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTCGGCGTCTGA 1157
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1158 CAGCCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCCCCTGGCCCCCCAGGCCCGA 1231
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1232 TGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTGCGTCGGGTGAGAGA 1305
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1306 GGCCCCAGCGGCCTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGGG 1379
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1380 CAGACCCGGGGAGCCAGGACTAGATGGTTTCCCTGGACCCCGAGGAGAGAAAGGTGATCGGAGCGAGCGTGGAG 1453
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1454 AGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGGACCACCAGGCCTG 1527
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1528 GACCAGCCGTGTCCCGTGGAGAATCCCACGTGCGGAGGCCGGAGAGGGGCACCAGGCTGGCGGGGCCCTGCGAG 1601
Query 928 ------------------------------------------------------------- 927
Sbjct 1602 GGGCAATGGGCCATGCCCTGCGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAG 1662
