Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12959
- Subject:
- XM_011534692.2
- Aligned Length:
- 1638
- Identities:
- 679
- Gaps:
- 933
Alignment
Query 1 ATGGAGTCTCGCTCTGGCATCCAGGCTGGAGTGCGGTGTCGCGATCTCGGCTCACTGCAACCTCCGCCTCTCGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTAAAGCAGTTCTCCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCTGTGGCTTCC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTTTTGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCAGACACACTTTGACCGTGAAGTTGGAC 222
|.| ||||.|| .||||||||||
Sbjct 1 ----------------------------------ATG--CCAAATC-----------------AGAAGTTGGAC 21
Query 223 GGACTAGCGAAGATCCGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 22 GGACTAGCGAAGATCCGGACTGCTCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCG 95
Query 297 CGGCAAGCCTGGGAGAAGAGGCGACCCTGGTCCTCCA---------------------------GGACCCCTGG 343
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 96 CGGCAAGCCTGGGAGAAGAGGCGACCCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTACCCGGGACCCCTGG 169
Query 344 GTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 GTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGA 243
Query 418 GACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGA 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 GACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGA 317
Query 492 CACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGA 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318 CACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGA 391
Query 566 TGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCA 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 392 TGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCA 465
Query 640 AGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGG 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 AGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGG 539
Query 714 TGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGACGTCCGGG 787
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| ||.||
Sbjct 540 TGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCC--CCAGG 611
Query 788 ATCCT----GGC---------------------CTCGGCTCTG---------TCT-------CCTCATG----C 816
||| ||| .|||.||.|| ||| |||||.| |
Sbjct 612 --CCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTATGATGGCAGGATCTTGGATGCCCTCAAGGGGCC 683
Query 817 TCC-------CAGAGGC-----TGGCTTCTTCCTCCAAAAAAAATGGATC---TGAGCC-----CCCGCCTGGC 870
||| |||.||| .|| ||.|| |.||||| .||||| |..||.|||.
Sbjct 684 TCCCGGACCACAGGGGCCCCCAGGG------CCACC-------AGGGATCCCTGGAGCCAAGGGCGAGCTTGGA 744
Query 871 TGTGCAGGGTGCCCCAGGCCTC---------AAGGGC-------GAGCAG---GGAGACACAGTGGTGATC--- 922
| |||..|||||||||||..|| |||||| || ||| ||||||.|| ||.||.|
Sbjct 745 T-TGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGGA-CAGAAAGGAGACCCA--GGAGAGCCTG 814
Query 923 ---------GACTA------------------------------------------------------------ 927
||||.
Sbjct 815 GGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGG 888
Query 928 -------------------------------------------------------------------------- 927
Sbjct 889 GAGAAGGGGGAGTCGGCGTCTGACAGCCTACAGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGCCCCCTGG 962
Query 928 -------------------------------------------------------------------------- 927
Sbjct 963 CCCCCCTGGCCCCCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGCAAAGGGAG 1036
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1037 AGAAGGGTGCGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGGCTG 1110
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1111 CCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGGACTAGATGGTTTCCCTGGACCCCGAGGAGAGAA 1184
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1185 AGGTGATCGGAGCGAGCGTGGAGAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGG 1258
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1259 GCGAGCCGGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGAGAATCCCACGTGCGGAGGCCGGAGAGGGGCA 1332
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1333 CCAGGCTGGCGGGGCCCTGCGAGGGGCAATGGGCCATGCCCTGCGGGCCCCGACGGGCTGCCTGTGCCTGGCTG 1406
Query 928 ---------- 927
Sbjct 1407 CTGGCATAAG 1416
