Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12959
- Subject:
- XM_017010018.1
- Aligned Length:
- 1101
- Identities:
- 675
- Gaps:
- 360
Alignment
Query 1 -----------------------------------------------------------------------ATG 3
|.|
Sbjct 1 ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG 74
Query 4 GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT 69
| ||||| |||..|.| |||.|| || |||||| .|||| ||..|| ||||..| ||||| |
Sbjct 75 G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T 134
Query 70 ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT 139
|||| ||.| || ||.|||| ||.||||||..|..||||| .||.||||
Sbjct 135 GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT 182
Query 140 ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC--- 189
|||||..| ||....||.| ||||.|| |..|| |.| .|||.||||..||
Sbjct 183 GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG 252
Query 190 AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 245
.||.|| ||.|.|||.|.||.| |.|||||||||||||||||||||||||||||||||
Sbjct 253 GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 326
Query 246 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 400
Query 320 ACCCTGGTCCTCCA---------------------------GGACCCCTGGGTTTGGATGGCAAGCCCGGACTT 366
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 401 ACCCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTACCCGGGACCCCTGGGTTTGGATGGCAAGCCCGGACTT 474
Query 367 CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC 548
Query 441 TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG 622
Query 515 GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG 696
Query 589 CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC 770
Query 663 CAAGGGCGAGCCAGGGAGCATGGGGCCTCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGC 736
|||| |||||||| ||..|.||..|.||.|||.|
Sbjct 771 CAAG-----------------GGGGCCTC---------ACTCTCTGCCCTGTCCCCAA---------------- 802
Query 737 CTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGACGTCCGGGATCCTGGCCTCGGCTCTGTCTCC 810
|||| |||.|| |||||.|.||| ||.||.|.| |||| ||
Sbjct 803 ---GCCA-------------GGAACT-----------GGGTGTCATCC----TCATGCCTT--GCTC-----CC 838
Query 811 TCA------------TGCTCCCAGAGGCTGGCTTCTTC-------CTCCAAAAAAAATGGATC---TGAGCCCC 862
.|| .||..|||.|..||||| | |||| |||||| || ||||||||
Sbjct 839 CCAACCCCTCGCAACAGCCACCAAATCCTGGC-----CAGCCAGTCTCC----AAAATG--TCCCTTGAGCCCC 901
Query 863 CGCCTGGCTGTGCAGGGTGCCCCAGGCCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTA 927
.|| |.|||||||.|
Sbjct 902 TGC------------GCTGCCCCAAG--------------------------------------- 915