Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12966
• Subject: XM_006501991.2
• Aligned Length: 2030
• Identities: 1455
• Gaps: 385

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATGACGTTTCGCAAAAGGCAGAGATTCTGCTTTCCTCATGTAAACCTGTCCCTAAGTCCTATGTGCCAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTTGGCAAGGGAGATGTAAAGGACAAGTTTGAAGCCATGCAGAGGGCCAGGGAAGAAAGAAATCAAAGGCGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTAGAGACGAAAAGCAAAGAAGAAAAGAACAATATATTAGAGAGAGAGAATGGAACAGGAGAAAGCAGGAGATT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAGAAATGCTTGCTTCTGATGATGAGGAAGAAAGTTCTCCTAAAATAGAAAAGGCTTATGTCCCAAAGCTAAC  296

Query    1  ----------------------------ATGGAGAAACAAAGACAAGAGGAACAAAGGAAGAGAACGGAGGAGG  46
                                        |||||||||||.|||||.||.||||||||.||||||||.||.||.|
Sbjct  297  AGGGACAGTTAAAGGTAAATTCGATGAAATGGAGAAACACAGACAGGAAGAACAAAGAAAGAGAACAGAAGAAG  370

Query   47  AACGAAAACGCAGAATTGAGCAGGATATGTTAGAAAAGAGGAAAATACAGCGTGAATTAGCAAAAAGGGCTGA-  119
            ||.|||||||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||||.||.|| 
Sbjct  371  AAAGAAAACGCAGAATTGAGCAGGATCTGTTAGAAAAGAGGAAAATACAGCGCGAATTAGCAAAAAGAGCGGAG  444

Query  120  -----------------------------------------ACAGGAAGGAGATGATTCACTACTTATAACTGT  152
                                                     |.|||||||||||||.||||||||||||||.||
Sbjct  445  CAGATTGAGGACATAAACAATACGGGAACCGAGTCCGCATCAGAGGAAGGAGATGACTCACTACTTATAACAGT  518

Query  153  GGTACCTGTCAAATCATATAAAACATCTGGAAAAATGAAAAAGAATTTTGAGGATCTAGAAAAAGAACGTGAAG  226
            ||||||||.|||||||||.||||||.||||||||   |.||||.||..||||||.||.||.|.||||   ||||
Sbjct  519  GGTACCTGCCAAATCATACAAAACACCTGGAAAA---ACAAAGGATCCTGAGGACCTGGACAGAGAA---GAAG  586

Query  227  AGAAA-GAAAGGATCAAGTACGAGGAAGATAAAAGAATAAGATATGAAGAACAACGACCATCTCTCAAGGAAGC  299
             |||| |..||.|.|||..|.||.||||||||   |||.||||||||||||.|..|.|.|..||||||.|||||
Sbjct  587  -GAAATGGGAGAACCAACCATGAAGAAGATAA---AATGAGATATGAAGAAGAGTGCCGAGTTCTCAAAGAAGC  656

Query  300  AAAGTGTCTTTCATTAGTTATGGATGATGAAATAGAAAGTGAAGCAAAAAAAGAATCACTTTCTCCCAGAAAAT  373
            |||.||||||||||||||.|||||||||||||.|      ||.||.|||||||||||||.||.|||..||||||
Sbjct  657  AAAATGTCTTTCATTAGTCATGGATGATGAAACA------GAGGCCAAAAAAGAATCACATTTTCCTGGAAAAT  724

Query  374  TGAAACTAACTTTTGAAGAACTGGAGCGACAAAGACAAGAAAACCGAAAGAAGCAAGCTGAAGAGGAAGCAAGA  447
            |||||..||||||||||||||||||.|||||||||||||||||.||.|||||||||||.|||||||||||.|||
Sbjct  725  TGAAATCAACTTTTGAAGAACTGGAACGACAAAGACAAGAAAATCGCAAGAAGCAAGCGGAAGAGGAAGCGAGA  798

Query  448  AAACGTTTAGAAGAAGAGAAGCGTGCTTTTGAAGAAGCAAGGCGGCAAATGGTAAATGAAGATGAGGAAAACCA  521
            ..|||.|||||||||||||..|||.|.|||||.||.||.||..||||.|||||||||||.||.||.||||||||
Sbjct  799  CGACGCTTAGAAGAAGAGAGACGTTCCTTTGAGGAGGCGAGAAGGCACATGGTAAATGAGGAGGATGAAAACCA  872

Query  522  AGACACAGCAAAAATTTTTAAAGGGTACCGCCCTGGTAAACTCAAACTCAGTTTTGAAGAAATGGAAAGGCAAA  595
            |||.|.||.||.|.|||||||||.|||||||||.||.||||||||||||||||||||.|||||.||||||||||
Sbjct  873  AGATAGAGAAACAGTTTTTAAAGAGTACCGCCCAGGAAAACTCAAACTCAGTTTTGAGGAAATAGAAAGGCAAA  946

Query  596  GAAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGAAGCCAGAAGGAGAATAGAGGAAGAAAAGAAGGCGTTTGCT  669
            |.||||||||.||||||.|.||||||||.||.||.|||.|||||||||||||||||||.|||..|||.||||||
Sbjct  947  GGAGAGAAGACGAAAAACGAAAAGCAGAGGAGGAGGCCCGAAGGAGAATAGAGGAAGAGAAGGCGGCATTTGCT  1020

Query  670  GAAGCAAGGAGAAATATGGTAGTAGATGATGACTCCCCAGAGATGTATAAGACAATCTCTCAAGAATTTCTTAC  743
            |||||||||||||..||||||.||||||||||.|||||||||||.|||||.|||.|.||||||||||.||||||
Sbjct 1021  GAAGCAAGGAGAAGCATGGTATTAGATGATGATTCCCCAGAGATTTATAAAACAGTGTCTCAAGAATCTCTTAC  1094

Query  744  ACCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAAAATGGAAGAAGAAAAACGACGAACAGAGG  817
            .||.||||||||.|||||||||||||||.|||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 1095  TCCTGGAAAACTAGAAATTAATTTTGAACAATTATTAAGACAAAAAATGGAAGAAGAAAGACGACGAACAGAGG  1168

Query  818  AGGAACGGAAGCATAAGCTAGAAATGGAGAAACAAGAATTTGAACAACTGAGACAGGAAATGGGAGAGGAAGAG  891
            |.|||||.|.||||||.|||||||||||||||||.||||||||||||||||||||.|||||||||.|||||||.
Sbjct 1169  AAGAACGCAGGCATAAACTAGAAATGGAGAAACAGGAATTTGAACAACTGAGACAAGAAATGGGAAAGGAAGAA  1242

Query  892  GAAGAAAATGAAACCTTTGGATTGAGCAGAGAATATGAAGAACTGATCAAATTAAAAAGGAGTGGCTCTATTCA  965
            |||||||||||||.||||||.|||||.|||||||||||||||.|.||.||||||||||||||||||||.|||||
Sbjct 1243  GAAGAAAATGAAAGCTTTGGGTTGAGTAGAGAATATGAAGAATTAATTAAATTAAAAAGGAGTGGCTCAATTCA  1316

Query  966  AGCTAAAAACCTAAAAAGCAAGTTTGAAAAAATTGGACAGTTGTCTGAAAAAGAAATACAGAAAAAAATAGAAG  1039
            |||||||||.|||||||||||||||||||||||||||||.|||||||||||||||.||||||||||.|||||||
Sbjct 1317  AGCTAAAAATCTAAAAAGCAAGTTTGAAAAAATTGGACAATTGTCTGAAAAAGAAGTACAGAAAAAGATAGAAG  1390

Query 1040  AAGAGCGAGCAAGAAGGAGAGCAATTGACCTTGAAATTAAAGAGCGAGAAGCTGAAAATTTTCATGAGGAAGAT  1113
            ||||||||||||.||||.|||||||||||||||||||.||||||||||||||.|||||.||.||||||||.|||
Sbjct 1391  AAGAGCGAGCAAAAAGGCGAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGAAAACTTCCATGAGGACGAT  1464

Query 1114  GATGTTGATGTTAGGCCTGCAAGAAAAAGCGAGGCTCCATTTACTCACAAAGTGAATATGAAAGCTAGATTTGA  1187
            |||||||||||.||||||||||..||.||.|||.||||.||||||||.||.|||||.||||||||.||.|||||
Sbjct 1465  GATGTTGATGTAAGGCCTGCAAAGAAGAGTGAGTCTCCTTTTACTCATAAGGTGAACATGAAAGCCAGGTTTGA  1538

Query 1188  ACAAATGGCTAAGGCAAGAGAAGAAGAAGAACAAAGAAGAATTGAAGAACAAAAGTTACTACGCATGCAGTTTG  1261
            |||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1539  ACAAATGGCAAAGGCAAGAGAAGAGGAAGAACAAAGAAGAATTGAAGAACAAAAGTTACTACGAATGCAGTTTG  1612

Query 1262  AACAAAGGGAAATTGATGCAGCACTACAAAAGAAAAGAGAAGAGGAGGAGGAGGAAGAAGGTAGCATCATGAAT  1335
            ||||.|..|||||.|||||.|||.||||.||||||||||||||.||||||||.||||||||||||||..|.|||
Sbjct 1613  AACAGAAAGAAATCGATGCGGCATTACAGAAGAAAAGAGAAGATGAGGAGGAAGAAGAAGGTAGCATTGTTAAT  1686

Query 1336  GGCTCCACTGCTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAGAAGCCTCTTAA-AAACACAT  1408
            |||||||||.|||||||||||||||||||||||||||||||||||||||||||.|||||| |||| |||.||.|
Sbjct 1687  GGCTCCACTACTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAAAAGCCT-TTAAGAAATACCT  1759

Query 1409  CAGTTGTAGACAGTGAGCCAGTCAGATTTACGGTTAAAGTAACAGGAGAACCCAAACCAGAAATTACATGGTGG  1482
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||.|||||||||||||||
Sbjct 1760  CAGTTGTAGACAGTGAGCCAGTCAGATTTACTGTTAAAGTAACAGGAGAACCCAAGCCGGAAATTACATGGTGG  1833

Query 1483  TTTGAAGGAGAAATACTGCAGGATGGAGAAGACTATCAATATATTGAAAGGGGAGAAACTTACTGCCTTTACTT  1556
            ||||||||||||||||||||||||||||||||||||||.||.||.|||||.||.||||||||||||||.||.||
Sbjct 1834  TTTGAAGGAGAAATACTGCAGGATGGAGAAGACTATCAGTACATCGAAAGAGGTGAAACTTACTGCCTGTATTT  1907

Query 1557  ACCAGAAACTTTCCCAGAAGATGGAGGAGAGTATATGTGTAAAGCAGTCAACAATAAAGGATCTGCAGCTAGTA  1630
            |||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.||.|||||.||.|
Sbjct 1908  ACCGGAAACCTTCCCAGAAGATGGAGGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCA  1981

Query 1631  CCTGTATTCTTACCATTGAAACTGATGACTAC  1662
            ||||.||||||||||||||||..|||||||||
Sbjct 1982  CCTGCATTCTTACCATTGAAATGGATGACTAC  2013