Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13007
- Subject:
- XM_006505210.3
- Aligned Length:
- 1137
- Identities:
- 729
- Gaps:
- 294
Alignment
Query 1 AT-GTCCCTCCGGAG-GCACATTGGGAACC-----CTG---AGTATCTGATGAAAAGGATACCACAGAACCCAA 64
|| |||||| || .||.||.|..|||| ||| |||||||||..|.|.||||||||||||||||||
Sbjct 1 ATGGTCCCT----AGTTCAAATAGCCAACCTCACTCTGAGAAGTATCTGACCAGACGGATACCACAGAACCCAA 70
Query 65 GATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATT 138
|.||.||.|||.||||.|||||||||||.||||
Sbjct 71 GGTATCAACATGTCAAGTCAAGACTGGATACTG----------------------------------------- 103
Query 139 AAGAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCAT 212
||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||
Sbjct 104 -------ATTATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCAT 170
Query 213 CCAAGTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATT 286
.|||||.||||||||.||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 171 TCAAGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAATGATT 244
Query 287 CTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG 360
|||||.|||||||..||||||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.
Sbjct 245 CTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCC 318
Query 361 AGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG 434
|||||||..||||||||.||||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||
Sbjct 319 AGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGG 392
Query 435 TGTTGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTG 508
.|||||||||||||||.||||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|
Sbjct 393 CGTTGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGG 466
Query 509 ACTGCCCCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGT 582
||||.||||||||||||||||||||.||.||.|||||||||||.||||||||.||||||||.||.|||||||||
Sbjct 467 ACTGTCCCTTCCTGCTGCTAGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGT 540
Query 583 TACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGG 656
|||||.|||||||||||.||.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.||
Sbjct 541 TACCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGG 614
Query 657 CAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT 730
||||||||||||..|.||.|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.|
Sbjct 615 CAAGATCATCATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGT 688
Query 731 TTGAAAACCTCTTCATGCTTTCCGGAG----------------------------------------------- 757
|||||||||||||||||||||||||.|
Sbjct 689 TTGAAAACCTCTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGT 762
Query 758 -------------------------------------------------------------------------- 757
Sbjct 763 TCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGC 836
Query 758 -------------------------------------------------------------------------- 757
Sbjct 837 CCTGCCAGCTGAGAACAAGTGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACC 910
Query 758 ---------------------GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGC 809
|||||||||||||...||||||..|.||||.|||.||.||||||.||| .|||
Sbjct 911 AGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGC 984
Query 810 CCGAAGCGCT---CAGAATCTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGT 876
| |||.| |||||.||| ||| ||.|.||.|||||||||||.|.|||||||.|.||||.|||.
Sbjct 985 C----GCGGTGGCCAGAACCTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGC 1050
Query 877 GGTCACCTGCAAGGCAAACCCTGGAAG 903
|||||||||||||||||||||||||||
Sbjct 1051 GGTCACCTGCAAGGCAAACCCTGGAAG 1077