Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_13007
• Subject: XM_011241090.1
• Aligned Length: 1128
• Identities: 763
• Gaps: 243

Alignment

Query    1  ATGTCCCTCCGGAGGCACATTGGGAACCCTG-AGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGC  73
            |||||..||          ||..||..|||| |.|||||||..|.|.|||||||||||||||||||.||.||.|
Sbjct    1  ATGTCATTC----------TTAAGAGTCCTGCATTATCTGACCAGACGGATACCACAGAACCCAAGGTATCAAC  64

Query   74  ATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAAGAAAAAT  147
            ||.||||.|||||||||||.|||||||||||.|||||.|||||.|.|||||||||.|||||||||||.||||||
Sbjct   65  ATGTCAAGTCAAGACTGGATACTGGTAACAGCATGACCAAATACATTGAGAAGCTAGAAGAGATTAAAAAAAAT  138

Query  148  TATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGC  221
            ||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||.|||||.||
Sbjct  139  TATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCATTCAAGTCGC  212

Query  222  TTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCTT  295
            ||||||.||.||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||.|||
Sbjct  213  TTCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAATGATTCTGCAACTT  286

Query  296  CAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAG  369
            ||||..||||||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.|||||||..
Sbjct  287  CAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTC  360

Query  370  CAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTGTTGGGGA  443
            ||||||||.||||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||.||||||||
Sbjct  361  CAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGGCGTTGGGGA  434

Query  444  ACTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCT  517
            |||||||.||||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|||||.||||
Sbjct  435  ACTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGGACTGTCCCT  508

Query  518  TCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCAATT  591
            ||||||||||||||||.||.||.|||||||||||.||||||||.||||||||.||.||||||||||||||.|||
Sbjct  509  TCCTGCTGCTAGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGTTACCCCATT  582

Query  592  GCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGGCAAGATCAT  665
            ||||||||.||.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.|||||||||||
Sbjct  583  GCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGGCAAGATCAT  656

Query  666  CATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACC  739
            |||..|.||.|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.||||||||||
Sbjct  657  CATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGTTTGAAAACC  730

Query  740  TCTTCATGCTTTCCGGAG--------------------------------------------------------  757
            ||||||||||||||||.|                                                        
Sbjct  731  TCTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCA  804

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  805  GCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGCCCTGCCAGC  878

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  879  TGAGAACAAGTGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACCAGGGACCAG  952

Query  758  ------------GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGCCCGAAGCGC  818
                        |||||||||||||...||||||..|.||||.|||.||.||||||.||| .||||    |||.
Sbjct  953  CAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCC----GCGG  1022

Query  819  T---CAGAATCTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTG  885
            |   |||||.|||    |||    ||.|.||.|||||||||||.|.|||||||.|.||||.|||.|||||||||
Sbjct 1023  TGGCCAGAACCTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTG  1092

Query  886  CAAGGCAAACCCTGGAAG  903
            ||||||||||||||||||
Sbjct 1093  CAAGGCAAACCCTGGAAG  1110