Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13010
- Subject:
- NM_054089.4
- Aligned Length:
- 2559
- Identities:
- 384
- Gaps:
- 2136
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTTGCGAGAAGTGGAACCATGTGGCCGAAATGCTGCTCTTCATTGAAGACCGCGAGGAGGAGTACAAGAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTTTGCCTCTGCTCCCGGGCATTTGTGGAAGATCGAAAATTGTACAATTTGGGATTAAAAGGCTACTATGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAGCAGTGGCAATAATGCAGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACATAGCCCAAATGAAAGTGACCTTGATTCTGAGGCCAAACTCATGAGAAGTATGGGACTACCAATTCAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTAGAATGTCTTCACATGAGAATTTTGAGATGTCTATGAATGCAAGAAATAAAGCTAAAGTAAAGCAAAAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGAAAACACCAGAAGCGGTATTTAGATGAAATGGTTCGGGAATCCTGGAGAAATGACTATGAAGAAGATGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGTAGTGTCAGATGACCCATCTTCAGTTGAACACTGTGAGAACAACAGAACATGTGAAATTCAAAGCAAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTTCTGAAGTAGAAAACCTTCCTGTTGAAAATACACTGGCACCAAAGCTAGAGGTCCCAGAGAATTGGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTACTGGAATGAATATGGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAAGTATCCAGACCAGACACTGTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGAGCCTTGGAACCTCCCTGATACAAAGGAAGAATGGGAACAACATTACAGTCAGCTTTATTGGTATTATTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAACAATTTCAGTATTGGGAAGCTCAGGGCTGGACTTTTACTGCCTCACAAAACTGTGATAAAGATGTTTACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATCTCACACAGAAGTAGACCAGAATGCTGAGAGCAGCCTGAAAGCAGATGTAATGACTTTTTCATCTTCACCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATATAGTTGAGGATGAAATCCCTGGCTCAAATGATAATGACCACAATGAAATTATTACTGCGATTAACAACAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACTGTGAGTGCAGAGAAAGTAGAACAGAGCCAGTTAGATTCCTCTCAACACTGTGACGAGCCGCTCAGTGAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCACTGGGAAAGAGTGCCCTGCCTCTGGAGGAAGTGACTCCTGTAATGGAACACCCAAAGAAAATGATATATCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAACAGAAGCTCAGACCAACCAGCTAAAGAGTTGCAGGAGTCTTCAGGAACAAATAAAGGTAAACATAGACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACACCATAATGGGGCTGATGGACATGAGAGTGACGATGACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCATGAATTGGATGTTGATGAAAACCCAGATTCAGAAGTTGATGACAATGGTTTCCTTCTAGGATTCAAGCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCTCAGGACAAAAATATGGTGGAATTCCAAATTTCAGCCATCGACAGGTCAGGTATCTAGAGAAGAATGTGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATACAAATCAAAGTACCTGGATCTGCGCAAGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACCGAGGACT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGGGAAACCTTTTGTCGTGTGTAAGAGTAAAGTACGGAGTAAGGTAGAAAAATTCCTAAAATGGGTTAATGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAGTAGATGAGGAGACATCACAGGATTCTCTTTCTCAAAACAAAATGCAAGACACTTGCACAAGCAGTGACTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAGGAACAAGACATGTCCTTGGAGAAAGCTGACAACCTGATGGAGACCAGAGATCCAGAACCTGAAAAATGTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGATCATCTCTTCAGCCACTGAACTTGAAGCAGAAAAGAGTGAAGTAGGCTCCTTAGTAGCAACTGTTCCAGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AACTGTTCAACTGAAGAAATACCAAACTCTCCCCATGCAGAAACAGAAGTTGAAATAAAGAAGAAAAAGAAGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAACAAGAACAAAAAGATAAATGATCTACCACCTGAAATAGCTTCTGTTCCAGAGCTGGCTAAATACTGGGCCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGAGATACAGGCTCTTCTCTCGCTTTGATGATGGAATCAAATTGGACAAAGAGGGCTGGTTTTCAGTCACTCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGAAGATTGCTGAACACATTGCTGGCCGTGTCAGTCAGGCCTTCAGATGTGACGTTGTAGTAGATGCTTTCTG 2072
Query 1 ----------------------------------------ATGAGAGTGATTGCCATTGATATCGATCCTGTTA 34
|..|||||||||||.|||||||||||.|||||||
Sbjct 2073 TGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACCGGGAAAAGAGTGATTGCTATTGATATCGACCCTGTTA 2146
Query 35 AGATTGCCCTTGCTCGCAATAATGCAGAAGTTTATGGGATAGCAGATAAGATAGAGTTCATCTGTGGAGATTTC 108
|.||||..||||||||.||||||||.|||||||||||||||||||||||.||||||||.|||||||||||||||
Sbjct 2147 AAATTGATCTTGCTCGGAATAATGCTGAAGTTTATGGGATAGCAGATAAAATAGAGTTTATCTGTGGAGATTTC 2220
Query 109 TTGCTGCTGGCTTCTTTTTTAAAGGCTGATGTTGTGTTCCTCAGCCCACCTTGGGGAGGGCCAGACTATGCCAC 182
.||||..|||||.|.|.||||||.|||||||||||||||||.||.||||||||||||||||||||.|||||.||
Sbjct 2221 CTGCTCTTGGCTCCATGTTTAAAAGCTGATGTTGTGTTCCTAAGTCCACCTTGGGGAGGGCCAGATTATGCTAC 2294
Query 183 TGCAGAGACCTTTGACATTAGAACAATGATGTCTCCTGATGGCTTTGAAATTTTCAGACTTTCTAAGAAGATCA 256
||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||..|||||||||
Sbjct 2295 TGCAGAGACCTTCGACATTAGGACAATGATGTCTCCTGATGGCTTTGAAATTTTCAGGCTTTCCCAGAAGATCA 2368
Query 257 CTAATAATATTGTTTATTTTCTTCCAAGAAATGCTGATATTGACCAGGTGGCATCCTTAGCTGGGCCTGGAGGG 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||||.
Sbjct 2369 CTAATAATATTGTTTATTTTCTTCCAAGAAATGCTGATATTGACCAGGTGGCATCCTTGGCTGGGCTTGGAGGA 2442
Query 331 CAAGTGGAAATAGAACAGAACTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG 404
|||||||||||||||||||||||.|||||||||||.||.|||||.|||||||||||.|||||||||||.||..|
Sbjct 2443 CAAGTGGAAATAGAACAGAACTTTCTTAACAACAAGTTAAAGACCATCACTGCATACTTTGGTGACCTGATCAG 2516
Query 405 AAGACCAG--CCTCTGAA-ACC--------------------- 423
|||||||| |.|||||| |||
Sbjct 2517 AAGACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGGAAGTG 2559
