Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13010
- Subject:
- XM_006537558.2
- Aligned Length:
- 2292
- Identities:
- 384
- Gaps:
- 1869
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAAGTATGGGACTACCAATTCAGTTTGGTAGAATGTCTTCACATGAGAATTTTGAGATGTCTATGAATGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGAAATAAAGCTAAAGTAAAGCAAAAAAGAAGAAAACACCAGAAGCGGTATTTAGATGAAATGGTTCGGGAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGGAGAAATGACTATGAAGAAGATGACCTTGTAGTGTCAGATGACCCATCTTCAGTTGAACACTGTGAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACAGAACATGTGAAATTCAAAGCAAAGCAGGTTCTGAAGTAGAAAACCTTCCTGTTGAAAATACACTGGCACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAGCTAGAGGTCCCAGAGAATTGGGAAAAGTACTGGAATGAATATGGAGAAGGGCTGTTGTGGCAAAGCTGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGAGAAGTATCCAGACCAGACACTGTCTTCTGAGCCTTGGAACCTCCCTGATACAAAGGAAGAATGGGAACAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATTACAGTCAGCTTTATTGGTATTATTTGGAACAATTTCAGTATTGGGAAGCTCAGGGCTGGACTTTTACTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCACAAAACTGTGATAAAGATGTTTACACATCTCACACAGAAGTAGACCAGAATGCTGAGAGCAGCCTGAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGATGTAATGACTTTTTCATCTTCACCTAATATAGTTGAGGATGAAATCCCTGGCTCAAATGATAATGACCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATGAAATTATTACTGCGATTAACAACATAACTGTGAGTGCAGAGAAAGTAGAACAGAGCCAGTTAGATTCCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAACACTGTGACGAGCCGCTCAGTGAAATCACTGGGAAAGAGTGCCCTGCCTCTGGAGGAAGTGACTCCTGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGGAACACCCAAAGAAAATGATATATCTGAGAACAGAAGCTCAGACCAACCAGCTAAAGAGTTGCAGGAGTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGGAACAAATAAAGGTAAACATAGACCACACCATAATGGGGCTGATGGACATGAGAGTGACGATGACCCACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAGCATAAGCCCAGCAAAGTGAAGAGAAGCCATGAATTGGATGTTGATGAAAACCCAGATTCAGAAGTTGATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACAATGGTTTCCTTCTAGGATTCAAGCATGGCTCAGGACAAAAATATGGTGGAATTCCAAATTTCAGCCATCGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGTCAGGTATCTAGAGAAGAATGTGAAATACAAATCAAAGTACCTGGATCTGCGCAAGCAGATGCCTGTGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCAAGCACATCCTGTTCACCGAGGACTCAGGGAAACCTTTTGTCGTGTGTAAGAGTAAAGTACGGAGTAAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAGAAAAATTCCTAAAATGGGTTAATGAACGAGTAGATGAGGAGACATCACAGGATTCTCTTTCTCAAAACAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGCAAGACACTTGCACAAGCAGTGACTCAGAGGAACAAGACATGTCCTTGGAGAAAGCTGACAACCTGATGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACCAGAGATCCAGAACCTGAAAAATGTCAGATCATCTCTTCAGCCACTGAACTTGAAGCAGAAAAGAGTGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGGCTCCTTAGTAGCAACTGTTCCAGAGAACTGTTCAACTGAAGAAATACCAAACTCTCCCCATGCAGAAACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAGTTGAAATAAAGAAGAAAAAGAAGAAGAACAAGAACAAAAAGATAAATGATCTACCACCTGAAATAGCTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTTCCAGAGCTGGCTAAATACTGGGCCCAGAGATACAGGCTCTTCTCTCGCTTTGATGATGGAATCAAATTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACAAAGAGGGCTGGTTTTCAGTCACTCCTGAGAAGATTGCTGAACACATTGCTGGCCGTGTCAGTCAGGCCTTC 1776
Query 1 ---------------------------------------------------------------------ATGAG 5
|..||
Sbjct 1777 AGATGTGACGTTGTAGTAGATGCTTTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACCGGGAAAAG 1850
Query 6 AGTGATTGCCATTGATATCGATCCTGTTAAGATTGCCCTTGCTCGCAATAATGCAGAAGTTTATGGGATAGCAG 79
|||||||||.|||||||||||.||||||||.||||..||||||||.||||||||.|||||||||||||||||||
Sbjct 1851 AGTGATTGCTATTGATATCGACCCTGTTAAAATTGATCTTGCTCGGAATAATGCTGAAGTTTATGGGATAGCAG 1924
Query 80 ATAAGATAGAGTTCATCTGTGGAGATTTCTTGCTGCTGGCTTCTTTTTTAAAGGCTGATGTTGTGTTCCTCAGC 153
||||.||||||||.|||||||||||||||.||||..|||||.|.|.||||||.|||||||||||||||||.||.
Sbjct 1925 ATAAAATAGAGTTTATCTGTGGAGATTTCCTGCTCTTGGCTCCATGTTTAAAAGCTGATGTTGTGTTCCTAAGT 1998
Query 154 CCACCTTGGGGAGGGCCAGACTATGCCACTGCAGAGACCTTTGACATTAGAACAATGATGTCTCCTGATGGCTT 227
||||||||||||||||||||.|||||.||||||||||||||.||||||||.|||||||||||||||||||||||
Sbjct 1999 CCACCTTGGGGAGGGCCAGATTATGCTACTGCAGAGACCTTCGACATTAGGACAATGATGTCTCCTGATGGCTT 2072
Query 228 TGAAATTTTCAGACTTTCTAAGAAGATCACTAATAATATTGTTTATTTTCTTCCAAGAAATGCTGATATTGACC 301
||||||||||||.|||||..||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGAAATTTTCAGGCTTTCCCAGAAGATCACTAATAATATTGTTTATTTTCTTCCAAGAAATGCTGATATTGACC 2146
Query 302 AGGTGGCATCCTTAGCTGGGCCTGGAGGGCAAGTGGAAATAGAACAGAACTTCCTTAACAACAAATTGAAGACA 375
|||||||||||||.|||||||.||||||.|||||||||||||||||||||||.|||||||||||.||.|||||.
Sbjct 2147 AGGTGGCATCCTTGGCTGGGCTTGGAGGACAAGTGGAAATAGAACAGAACTTTCTTAACAACAAGTTAAAGACC 2220
Query 376 ATCACTGCATATTTTGGTGACCTAATTCGAAGACCAG--CCTCTGAA-ACC--------------------- 423
|||||||||||.|||||||||||.||..||||||||| |.|||||| |||
Sbjct 2221 ATCACTGCATACTTTGGTGACCTGATCAGAAGACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGGAAGTG 2292
