Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13013
- Subject:
- NM_001080407.3
- Aligned Length:
- 1968
- Identities:
- 918
- Gaps:
- 1038
Alignment
Query 1 ATGAAGTCCCCGCCCCTCCTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTAT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGTCCCCGCCCCTCCTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTAT 74
Query 75 CTCATCAGGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCATCAGGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTA 148
Query 149 GGTTTAATTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGTTTAATTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGT 222
Query 223 CGGGGTAAGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGGGTAAGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGT 296
Query 297 GCCCAGGGAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCCAGGGAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTC 370
Query 371 CGTGGAACCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CGTGGAACCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTG 444
Query 445 ATGGCCGCAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCCCTACATCTGCAGTGAGATGGACCTCGGGGG 518
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 445 ATGGCCGCAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGG 518
Query 519 CTTGCCCAGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTGCCCAGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTG 592
Query 593 AGAAGTATTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAAGTATTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTG 666
Query 667 CAAGTGGAGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAAGTGGAGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAG 740
Query 741 AAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGT 814
Query 815 TGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGGGAGCCAGTATA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||| |||
Sbjct 815 TGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAG-----ATA 883
Query 889 ----------GATGCAGGACTGCT-------CT-------CAGATGCCTC-----ACAAGCAGCA--------- 924
|||...|||.|.|| || |||||| |.|||||.||
Sbjct 884 AGCCCCTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATG----GGGAGATAAGCACCATGTTAAAGA 953
Query 925 -----------------------------ACTTCTTC-----------CTCCTTA------------------- 939
|.|||.|| ||||||.
Sbjct 954 TGCAAAGGAGGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATG 1027
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1028 GTGGAACCAACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGAC 1101
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1102 TATGATGCAGTGCTCACGGAGGCTGGAGATTACACAGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGT 1175
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1176 CTCAGCAACTCCCCTGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGT 1249
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1250 ACCTCCCGCTGTGGGACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAAC 1323
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1324 CTTCCCATAAACAATGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCG 1397
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1398 CCTCCGTGCCCACGCTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATA 1471
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1472 ATAAGGACCTGCACATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCAAGGACGAGTC 1545
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1546 AATTTTTCATGGCAAATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGA 1619
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1620 GGGCTTTACCATCTATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTG 1693
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1694 TCCCAGACAGCCACCAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTC 1767
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1768 CTGAGCCTGCTGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATTGGAATATTGG 1841
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1842 GCCTCAGAAAACACTGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTCATCTTGTTTGAGAAGA 1915
Query 940 -------------------------------------------- 939
Sbjct 1916 TGATGAGTGGCTCAGATATCAAATCTACAGACAAGCCCACGCTG 1959
