Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13014
- Subject:
- NM_001080407.3
- Aligned Length:
- 1978
- Identities:
- 444
- Gaps:
- 1514
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGTCCCCGCCCCTCCTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCATCAGGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTTTAATTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGGGTAAGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCAGGGAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTGGAACCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGCCGCAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGCCCAGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAGTATTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTG 666
Query 1 ---------------------------------------------ATGCCGTATCTCCACAAGGCCCTGCTGAG 29
|||||||||||||||||||||||||||||
Sbjct 667 CAAGTGGAGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAG 740
Query 30 AAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGT 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGT 814
Query 104 TGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAGATAAGCCC 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAGATAAGCCC 888
Query 178 CTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATGGGGAGATAAGCACCATGTTAAAGATGCAAAGGA 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATGGGGAGATAAGCACCATGTTAAAGATGCAAAGGA 962
Query 252 GGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCA 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCA 1036
Query 326 ACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGGCAAGTGTCGC 399
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|
Sbjct 1037 ACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTA------- 1103
Query 400 TGGTGTAGTAGCCTCTCCAGCATGGGCGGTGCTGGGGCTTTACAGAG----------GAGGCTCCGGAAGC-CT 462
||.||.||| .|||.| ||.| |||||.| .|||||.|| ||.|||.|..||.| ||
Sbjct 1104 TGATGCAGT--GCTCAC-------GGAG--GCTGGAG-ATTACACAGAAAAATATCTGAAGCTTCAAAAACTCT 1165
Query 463 GT---TCTG-----GCA---CCACT-----GGGTTCT------------------------------------- 483
.| |||| ||| ||.|| |.||.|.
Sbjct 1166 TTCAATCTGTCTCAGCAACTCCCCTGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGA 1239
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1240 CCGTCGCTGTACCTCCCGCTGTGGGACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAA 1313
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1314 CATGGAGAACCTTCCCATAAACAATGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCT 1387
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1388 CCGGAGGCCGCCTCCGTGCCCACGCTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTG 1461
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1462 AATGAGAATAATAAGGACCTGCACATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCA 1535
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1536 AGGACGAGTCAATTTTTCATGGCAAATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACT 1609
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1610 CTTCCCTGGAGGGCTTTACCATCTATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACC 1683
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1684 TGGAAGCCTGTCCCAGACAGCCACCAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAA 1757
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1758 GGACACCTTCCTGAGCCTGCTGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATT 1831
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1832 GGAATATTGGGCCTCAGAAAACACTGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTCATCTTG 1905
Query 484 ------------------------------------------------------ 483
Sbjct 1906 TTTGAGAAGATGATGAGTGGCTCAGATATCAAATCTACAGACAAGCCCACGCTG 1959
