Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13014
- Subject:
- XM_017017155.2
- Aligned Length:
- 1978
- Identities:
- 408
- Gaps:
- 1550
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGTCCCCGCCCCTCCTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCATCAGGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTTTAATTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGGGTAAGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCAGGGAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTGGAACCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGCCGCAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGCCCAGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAGTATTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTG 666
Query 1 ---------------------------------------------ATGCCGTATCTCCACAAGGCCCTGCTGAG 29
|||||||||||||||||||||||||||||
Sbjct 667 CAAGTGGAGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAG 740
Query 30 AAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGT 103
|||||||||||||||||||||||||||||||||| ||||
Sbjct 741 AAGAGGGATTGTGGAGCTTCTCTTGACCTCTGAT------------------------------------GTGT 778
Query 104 TGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAGATAAGCCC 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 TGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAGATAAGCCC 852
Query 178 CTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATGGGGAGATAAGCACCATGTTAAAGATGCAAAGGA 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 CTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATGGGGAGATAAGCACCATGTTAAAGATGCAAAGGA 926
Query 252 GGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCA 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 927 GGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCA 1000
Query 326 ACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGGCAAGTGTCGC 399
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|
Sbjct 1001 ACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTA------- 1067
Query 400 TGGTGTAGTAGCCTCTCCAGCATGGGCGGTGCTGGGGCTTTACAGAG----------GAGGCTCCGGAAGC-CT 462
||.||.||| .|||.| ||.| |||||.| .|||||.|| ||.|||.|..||.| ||
Sbjct 1068 TGATGCAGT--GCTCAC-------GGAG--GCTGGAG-ATTACACAGAAAAATATCTGAAGCTTCAAAAACTCT 1129
Query 463 GT---TCTG-----GCA---CCACT-----GGGTTCT------------------------------------- 483
.| |||| ||| ||.|| |.||.|.
Sbjct 1130 TTCAATCTGTCTCAGCAACTCCCCTGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGA 1203
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1204 CCGTCGCTGTACCTCCCGCTGTGGGACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAA 1277
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1278 CATGGAGAACCTTCCCATAAACAATGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCT 1351
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1352 CCGGAGGCCGCCTCCGTGCCCACGCTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTG 1425
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1426 AATGAGAATAATAAGGACCTGCACATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCA 1499
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1500 AGGACGAGTCAATTTTTCATGGCAAATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACT 1573
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1574 CTTCCCTGGAGGGCTTTACCATCTATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACC 1647
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1648 TGGAAGCCTGTCCCAGACAGCCACCAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAA 1721
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1722 GGACACCTTCCTGAGCCTGCTGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATT 1795
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1796 GGAATATTGGGCCTCAGAAAACACTGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTCATCTTG 1869
Query 484 ------------------------------------------------------ 483
Sbjct 1870 TTTGAGAAGATGATGAGTGGCTCAGATATCAAATCTACAGACAAGCCCACGCTG 1923
