Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13037
- Subject:
- XM_017010228.2
- Aligned Length:
- 1875
- Identities:
- 963
- Gaps:
- 903
Alignment
Query 1 ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCCAGAGGCTCTGCCACTCCGAATCTCACAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGGCAATGTTCAGTCTTTGT 222
|||||||||||||||
Sbjct 1 -----------------------------------------------------------ATGTTCAGTCTTTGT 15
Query 223 ATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16 ATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTT 89
Query 297 TGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTACAGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90 TGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTACAGC 163
Query 371 TGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGAATTAAATAGCTTTAATTACTTGGATCTGTAC 444
||||||||||||||||||||||||||||||||||||||
Sbjct 164 TGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATC------------------------------------ 201
Query 445 AGACTTGCTGACCTCTTTAACCTCACTTTGTTGGAGAAGGCAGTGATCGATTTCTTAGTGAAACATCTCTCTGA 518
Sbjct 202 -------------------------------------------------------------------------- 201
Query 519 ACTCCTGAAGAGCCGCCCAGAAGAAGTTCTAACGCTTCCCTATTGCCTGCTTCAGGAGGTGCTGAAGAGCGACC 592
Sbjct 202 -------------------------------------------------------------------------- 201
Query 593 GCCTGACCTCCCTGAGTGAAGAGCAGATCTGGCAGCTAGCTGTGAGGTGGTTGGAACACAACTGCCACTACCAG 666
||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 --------------------------------CAGCTAGCTGTGAGGTGGTTGGAACACAACTGCCACTACCAG 243
Query 667 TACATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 TACATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTC 317
Query 741 CCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318 CCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCT 391
Query 815 ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 392 ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGG 465
Query 889 AAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 AAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGC 539
Query 963 TGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGG 613
Query 1037 ACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGTCGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 614 ACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGTCGC 687
Query 1111 TATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGGTGC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 688 TATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGGTGC 761
Query 1185 CATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGATATT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 762 CATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGATATT 835
Query 1259 GCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTGGCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 GCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTGGCT 909
Query 1333 GATGGTCTTCTTTGGATATCAGGTAG---AAC--ATAC--CTCATGTTGGATTTATCAAAACACACTTTCATTG 1399
||||||||||||||||||||||||.| ||| |||| |.|| .|||||.||||..| |.||.|
Sbjct 910 GATGGTCTTCTTTGGATATCAGGTGGAGTAACTAATACGGCACA--------ATATCAGAACAGGC--TAATGG 973
Query 1400 TGGTATATATT--------------------------------------------------------------- 1410
|| |||.
Sbjct 974 TG-----TATGAACCTAACCAGAATAAGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCA 1042
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1043 TGGCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTGTG 1116
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1117 CGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTAATTTCAACCTGCTGACTGGCCAAAA 1190
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1191 TGAATCTGGAGTTGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTC 1264
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1265 TGGCTTGTATCCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAGAAGTATTCTATGGGCCTACACTCCCTTTT 1338
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1339 GCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGT 1412
Query 1411 ------------------------- 1410
Sbjct 1413 GCCTCATCACAGGATTGGCACCATC 1437
