Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13162
Subject:
XM_024453347.1
Aligned Length:
2229
Identities:
2006
Gaps:
222

Alignment

Query    1  ATGCCTCTGTTCCTCCTGCTCTTACTTGTCCTGCTGCTGCTGCTCGAGGACGCTGGAGCCCAGCAAGGTGATGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATGTGGACACACTGTACTAGGCCCTGAGAGTGGAACCCTTACATCCATAAACTACCCACAGACCTATCCCAACA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCACTGTTTGTGAATGGGAGATCCGTGTAAAGATGGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTGACATT  222
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------------ATGGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTGACATT  42

Query  223  GAAGATTCTGATTCTTGTCACTTTAATTACTTGAGAATTTATAATGGAATTGGAGTCAGCAGAACTGAAATAGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   43  GAAGATTCTGATTCTTGTCACTTTAATTACTTGAGAATTTATAATGGAATTGGAGTCAGCAGAACTGAAATAGG  116

Query  297  CAAATACTGTGGTCTGGGGTTGCAAATGAACCATTCAATTGAATCAAAAGGCAATGAAATCACATTGCTGTTCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  117  CAAATACTGTGGTCTGGGGTTGCAAATGAACCATTCAATTGAATCAAAAGGCAATGAAATCACATTGCTGTTCA  190

Query  371  TGAGTGGAATCCATGTTTCTGGACGCGGATTTTTGGCCTCATACTCTGTTATAGATAAACAAGATCTAATTACT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  191  TGAGTGGAATCCATGTTTCTGGACGCGGATTTTTGGCCTCATACTCTGTTATAGATAAACAAGATCTAATTACT  264

Query  445  TGTTTGGACACTGCATCCAATTTTTTGGAACCTGAGTTCAGTAAGTACTGCCCAGCTGGTTGTCTGCTTCCTTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  265  TGTTTGGACACTGCATCCAATTTTTTGGAACCTGAGTTCAGTAAGTACTGCCCAGCTGGTTGTCTGCTTCCTTT  338

Query  519  TGCTGAGATATCTGGAACAATTCCTCATGGATATAGAGATTCCTCGCCATTGTGCATGGCTGGTGTGCATGCAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  339  TGCTGAGATATCTGGAACAATTCCTCATGGATATAGAGATTCCTCGCCATTGTGCATGGCTGGTGTGCATGCAG  412

Query  593  GAGTAGTGTCAAACACGTTGGGCGGCCAAATCAGTGTTGTAATTAGTAAAGGTATCCCCTATTATGAAAGTTCT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  413  GAGTAGTGTCAAACACGTTGGGCGGCCAAATCAGTGTTGTAATTAGTAAAGGTATCCCCTATTATGAAAGTTCT  486

Query  667  TTGGCTAACAACGTCACATCTGTGGTGGGACACTTATCTACAAGTCTTTTTACATTTAAGACAAGTGGATGTTA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  487  TTGGCTAACAACGTCACATCTGTGGTGGGACACTTATCTACAAGTCTTTTTACATTTAAGACAAGTGGATGTTA  560

Query  741  TGGAACACTGGGGATGGAGTCTGGTGTGATCGCGGATCCTCAAATAACAGCATCATCTGTGCTGGAGTGGACTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  561  TGGAACACTGGGGATGGAGTCTGGTGTGATCGCGGATCCTCAAATAACAGCATCATCTGTGCTGGAGTGGACTG  634

Query  815  ACCACACAGGGCAAGAGAACAGTTGGAAACCCAAAAAAGCCAGGCTGAAAAAACCTGGACCGCCTTGGGCTGCT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  635  ACCACACAGGGCAAGAGAACAGTTGGAAACCCAAAAAAGCCAGGCTGAAAAAACCTGGACCGCCTTGGGCTGCT  708

Query  889  TTTGCCACTGATGAATACCAGTGGTTACAAATAGATTTGAATAAGGAAAAGAAAATAACAGGCATTATAACCAC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  709  TTTGCCACTGATGAATACCAGTGGTTACAAATAGATTTGAATAAGGAAAAGAAAATAACAGGCATTATAACCAC  782

Query  963  TGGATCCACCATGGTGGAGCACAATTACTATGTGTCTGCCTACAGAATCCTGTACAGTGATGATGGGCAGAAAT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  783  TGGATCCACCATGGTGGAGCACAATTACTATGTGTCTGCCTACAGAATCCTGTACAGTGATGATGGGCAGAAAT  856

Query 1037  GGACTGTGTACAGAGAGCCTGGTGTGGAGCAAGATAAGATATTTCAAGGAAACAAAGATTATCACCAGGATGTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  857  GGACTGTGTACAGAGAGCCTGGTGTGGAGCAAGATAAGATATTTCAAGGAAACAAAGATTATCACCAGGATGTG  930

Query 1111  CGTAATAACTTTTTGCCACCAATTATTGCACGTTTTATTAGAGTGAATCCTACCCAATGGCAGCAGAAAATTGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  931  CGTAATAACTTTTTGCCACCAATTATTGCACGTTTTATTAGAGTGAATCCTACCCAATGGCAGCAGAAAATTGC  1004

Query 1185  CATGAAAATGGAGCTGCTCGGATGTCAGTTTATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCTCCACCTC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1005  CATGAAAATGGAGCTGCTCGGATGTCAGTTTATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCTCCACCTC  1078

Query 1259  CTCGGAACAGCAATGACCTCAAAAACACTACAGCCCCTCCAAAAATAGCCAAAGGTCGTGCCCCAAAATTTACG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079  CTCGGAACAGCAATGACCTCAAAAACACTACAGCCCCTCCAAAAATAGCCAAAGGTCGTGCCCCAAAATTTACG  1152

Query 1333  CAACCACTACAACCTCGCAGTAGCAATGAATTTCCTGCACAGACAGAACAAACAACTGCCAGTCCTGATATCAG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1153  CAACCACTACAACCTCGCAGTAGCAATGAATTTCCTGCACAGACAGAACAAACAACTGCCAGTCCTGATATCAG  1226

Query 1407  AAATACTACCGTAACTCCAAATGTAACCAAAGATGTAGCGCTGGCTGCAGTTCTTGTCCCTGTGCTGGTCATGG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1227  AAATACTACCGTAACTCCAAATGTAACCAAAGATGTAGCGCTGGCTGCAGTTCTTGTCCCTGTGCTGGTCATGG  1300

Query 1481  TCCTCACTACTCTCATTCTCATATTAGTGTGTGCTTGGCACTGGAGAAACAGAAAGAAAAAAACTGAAGGCACC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301  TCCTCACTACTCTCATTCTCATATTAGTGTGTGCTTGGCACTGGAGAAACAGAAAGAAAAAAACTGAAGGCACC  1374

Query 1555  TATGACTTACCTTACTGGGACCGGGCAGGTTTTTATTTAATGGTCTCTTTGGCTTGCCGTCACAATGAAGGTTG  1628
            ||||||||||||||||||||||||||                                          ||||||
Sbjct 1375  TATGACTTACCTTACTGGGACCGGGC------------------------------------------AGGTTG  1406

Query 1629  GTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCA  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCA  1480

Query 1703  GTGAAGTTAATCACCTGAGTCCAAGAGAAGTCACCACAGTGCTGCAGGCTGACTCTGCAGAGTATGCTCAGCCA  1776
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GCGAAGTTAATCACCTGAGTCCAAGAGAAGTCACCACAGTGCTGCAGGCTGACTCTGCAGAGTATGCTCAGCCA  1554

Query 1777  CTGGTAGGAGGAATTGTTGGTACACTTCATCAAAGATCTACCTTTAAACCAGAAGAAGGAAAAGAAGCAGGCTA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTGGTAGGAGGAATTGTTGGTACACTTCATCAAAGATCTACCTTTAAACCAGAAGAAGGAAAAGAAGCAGGCTA  1628

Query 1851  TGCAGACCTAGATCCTTACAACTCACCAGGGCAGGAAGTTTATCATGCCTATGCTGAACCACTCCCAATTACGG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGCAGACCTAGATCCTTACAACTCACCAGGGCAGGAAGTTTATCATGCCTATGCTGAACCACTCCCAATTACGG  1702

Query 1925  GGCCTGAGTATGCAACCCCAATCATCATGGACATGTCAGGGCACCCCACAACTTCAGTTGGTCAGCCCTCCACA  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GGCCTGAGTATGCAACCCCAATCATCATGGACATGTCAGGGCACCCCACAACTTCAGTTGGTCAGCCCTCCACA  1776

Query 1999  TCCACTTTCAAGGCTACGGGGAACCAACCTCCCCCACTAGTGGGAACTTACAATACACTTCTCTCCAGGACTGA  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCCACTTTCAAGGCTACGGGGAACCAACCTCCCCCACTAGTGGGAACTTACAATACACTTCTCTCCAGGACTGA  1850

Query 2073  CAGCTGCTCCTCAGCCCAGGCCCAGTATGATACCCCGAAAGCTGGGAAGCCAGGTCTACCTGCCCCAGACGAAT  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CAGCTGCTCCTCAGCCCAGGCCCAGTATGATACCCCGAAAGCTGGGAAGCCAGGTCTACCTGCCCCAGACGAAT  1924

Query 2147  TGGTGTACCAGGTGCCACAGAGCACACAAGAAGTATCAGGAGCAGGAAGGGATGGGGAATGTGATGTTTTTAAA  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TGGTGTACCAGGTGCCACAGAGCACACAAGAAGTATCAGGAGCAGGAAGGGATGGGGAATGTGATGTTTTTAAA  1998

Query 2221  GAAATCCTT  2229
            |||||||||
Sbjct 1999  GAAATCCTT  2007

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