Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13173
- Subject:
- NM_001177383.2
- Aligned Length:
- 3021
- Identities:
- 1635
- Gaps:
- 1386
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGATTTCGGGTTTGGGGTGCTGCAGACCGCCCCGCTCCGAAGTAGCAGTCCTGGGCCCCTGTTCTGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCGTATGGTCCTTACGCCGTGGGGTCCGTCAACCCGCTGCCCTCCGCCACGCCCTTCGGCCCACTGTCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCACCGTTGCCTGTCACCGGCTTCTTAGAGGCCGCCTCCCCCTTCTCCGTCCCCCTCGGCGGCGGCGCGGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCGGCCGCCGCCGCTTCCTCTTCCTCCCCGTTCCTGGCGCATCAGCAGACCATGCAGGATGAGCTGCTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGCTGACACAGCAGCCGGCGCGGCCGCTTTCGGGGGCGGCGGCCACGGAGAAACTCCCCGACCACCACCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGCGGCACGATCGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTCAAACCGAGTCTGCACCACCCCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTCCTCCGCCTCCTCCTGCTGCTGCTGCCGCACCTCCTCCCCGCAGGACTTCAGTAAGCGGCAGCAGCAGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGAGCAGCCAGAAGAGGAAAGAGTTCAGCCCTCCCCACCTTCCCCACCCTCCGGACTCGAAGCCGCCGCCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCCTCCGCCGCTCCACTGCCCCGGTCGGTTCAGCCCGCCGCCGCCGCCAGCCGGCCCGCTCCTCCAGCCGGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCTCGCTCAGCGCCAGCAGCAACAGCCGCCGCAGCAGTTCAGCCTCCTGCATCAGCAGCACCTCTCGCCGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACTTCGCCCCGCGGCAGCGTCCGGCAGACCTGCCCCCGCTCCCGCAGCTCCCTCCCTCGCCGCCTGCAGCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCGGCGCCGCCACGGAGGCGCGGGCAGCCCTCGCAAGACCCCAGCCGCGGGCGAGGGCAGCGCCGCCGAGTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCAATGCGGGCTTGGCCTCCTCGACGCCGGTGAACCCCGCGCCGGGCTCCATGGAGTCCCCCAACCACCCTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTCAACAGTCCCAGTAACCTCCTGCCCGGAGGTGCGCTTGGCGCGGGCGCCTTCAGCAGCCTGCAGAGCCCGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTTCCACACCCGGGCGGCGGCGGCGGCGGCGGGGGCGGGGGGCCCCCAGGAGGCGGAGGGGGAGGCGGCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCGTCGCCGCCGCCGCTGCCCGGCTTCGGCACCCCCTGGTCGGTGCAGACCGCGTCGCCGCCACCCCAGCCCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGCCGCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCCGCAGCCGC 1258
Query 1 -----------------------------------------------------ATGCCGCCGCCCAGCCCCGAC 21
|||||||||||||||||||||
Sbjct 1259 CCGGCTCGTCTGCCACCACCCCGGGCGGCGGCAGCGGCGGCTCGCTCAGCGCCATGCCGCCGCCCAGCCCCGAC 1332
Query 22 TCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCCCGTGTC 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCCCGTGTC 1406
Query 96 GCCGCACGGCTGCACTGGGCTCAGCGTT---------------------------------------------- 123
||||||||||||||||||||||||||||
Sbjct 1407 GCCGCACGGCTGCACTGGGCTCAGCGTTCCGACGAGCGGCGGCGGCGGCGGCGGCTTCGGCGGCCCCTTCTCGG 1480
Query 124 --------------------CCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGCCGCCCGCGGCGCCG 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CTACCGCTGTGCCCCCTCCGCCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGCCGCCCGCGGCGCCG 1554
Query 178 CAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCAGGCGGCGGCCGCCGCCTT 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCAGGCGGCGGCCGCCGCCTT 1628
Query 252 CCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCA 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCA 1702
Query 326 GTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGA 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGA 1776
Query 400 ATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATT 1850
Query 474 TACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTA 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTA 1924
Query 548 ATACACTCTTACCCTTACAGGTAAGAATGGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTCTTTGGAA 621
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATACACTCTTACCCTTACA---------GGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTCTTTGGAA 1989
Query 622 AATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCTATCCACATCCAGGAAC 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1990 AATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCTATCCACATCCAGGAAC 2063
Query 696 TGACAATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCCCTCTTTCCAATAGATG 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064 TGACAATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCCCTCTTTCCAATAGATG 2137
Query 770 ATGGCTTGCTTGATGATGGTCACAGTGATCAAGTTGGAGTTTTAAATTCACCCACCTGTTATTCAGCTCACCAA 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 ATGGCTTGCTTGATGATGGTCACAGTGATCAAGTTGGAGTTTTAAATTCACCCACCTGTTATTCAGCTCACCAA 2211
Query 844 AATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAGATATTGATGAAGATGA 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2212 AATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAGATATTGATGAAGATGA 2285
Query 918 AATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAAGCAAGTCCTATT 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2286 AATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAAGCAAGTCCTATT 2359
Query 992 TTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATTGATGCTTGTATT 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2360 TTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATTGATGCTTGTATT 2433
Query 1066 GAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTTCAAATACGTCCTTG 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2434 GAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTTCAAATACGTCCTTG 2507
Query 1140 GAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAATTTTTGTTGGAG 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2508 GAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAATTTTTGTTGGAG 2581
Query 1214 GTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGAGTTTGTTATGCA 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2582 GTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGAGTTTGTTATGCA 2655
Query 1288 GGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAATCAGCAGAGCTA 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2656 GGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAATCAGCAGAGCTA 2729
Query 1362 TATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTGGAGGTAAAGCCAT 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2730 TATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTGGAGGTAAAGCCAT 2803
Query 1436 ATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCTCCCTTTTTTTGT 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2804 ATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCTCCCTTTTTTTGT 2877
Query 1510 GCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGCTGGACGTGAGTT 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2878 GCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGCTGGACGTGAGTT 2951
Query 1584 CCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGGAAC 1644
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2952 CCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGGAAC 3012
